PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR90308.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | ERF | ||||||||
Protein Properties | Length: 174aa MW: 19156.3 Da PI: 4.5551 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.4 | 4e-19 | 15 | 65 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y+GVr +k +g+Wv+eIr+p gk++r++lg+f t e+Aa+a++ a+ +l+ge RWR90308.1 15 KYRGVRKRK-WGKWVSEIREP---GKKTRIWLGSFETQEMAAAAYDVAAHYLRGE 65 8*****999.**********8...557**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence |
MEGTSDDGRR PPIVKYRGVR KRKWGKWVSE IREPGKKTRI WLGSFETQEM AAAAYDVAAH 60 YLRGEDARLN FPELAGRLPR PASSDPDDIR AAAIEAAGIL RSSPDNANAG SSGSQPSTAS 120 GFLASQIDES PLDSPKMWGE LAEAMLLSPP QFDTTGEMSD SEDMQMQQYS LWDY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33760.1 | 1e-34 | ERF family protein |