PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR90275.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | DBB | ||||||||
Protein Properties | Length: 188aa MW: 20590.3 Da PI: 6.6833 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 19.8 | 1.6e-06 | 4 | 46 | 5 | 41 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 C+ +e+ e+ C ++ lC dC ++ H H++ p RWR90275.1 4 QCDVCERAEALVLCCADEAALCWDCDQKVHAAnklagkHQRLP 46 7******9**********************6678888888877 PP | |||||||
2 | zf-B_box | 31.7 | 3.2e-10 | 52 | 86 | 1 | 35 |
zf-B_box 1 seerkCpeHeekelqlfCedCqqllCedClleeHk 35 s+++kC+ ++ek +fC +++ l+C++C +++H RWR90275.1 52 SQAPKCDICQEKSGYFFCLEDRALFCRQCDVSIHT 86 5889****************************993 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence |
MKIQCDVCER AEALVLCCAD EAALCWDCDQ KVHAANKLAG KHQRLPLSHP SSQAPKCDIC 60 QEKSGYFFCL EDRALFCRQC DVSIHTVSPY VSSHQRFLVT GVRVAPQQHS NMTAPDLLNC 120 STSSASSVEV PNKKCPILSS AGVTTSIHTG EQMVGLRPHW PLDEILTNAE YNSSYGFSEL 180 GSSRISSQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78600.1 | 9e-62 | DBB family protein |