PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR90262.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 359aa MW: 40530.9 Da PI: 7.0859

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR90262.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	159.7	1.1e-49	23	148	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 +pGfrFhPt+eel+ +yL++kvegk++++ e i+ +d+y+++Pw+Lp+ ++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d+ ++++++ + RWR90262.1 23 MPGFRFHPTEEELIEFYLRRKVEGKRFNV-ELITFLDLYHYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRVIKNESSYSI 120 79*************************.89***********8778899***************************************** PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 glkktLvfy+g+apkg++t+W+m+eyrl RWR90262.1 121 GLKKTLVFYTGKAPKGVRTSWIMNEYRL 148 ************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MANASAMSHD DDDNDDHAND VVMPGFRFHP TEEELIEFYL RRKVEGKRFN VELITFLDLY 60 HYDPWELPAL AAIGEKEWFF YVPRDRKYRN GDRPNRVTTS GYWKATGADR VIKNESSYSI 120 GLKKTLVFYT GKAPKGVRTS WIMNEYRLPR HESEQYKKAE ISLCRVYKRP GVEDHCPLPN 180 SISSRPSSSN AIQSSKKHNS GHQATRSSQA PQQNSPSSSE IDKLHEVGST SSTDDQATIV 240 FPQHRAYGAV APTSSMSSTS AEADQSLLHY SKQLASFLPN SAIFPSSSSS STAAVDDLHR 300 VVDYPHIYPH YPSQMLQLSS THSQSLQLNT LSNSLPTLSD KLWEWNPIPE ASRDYSSYK

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MANASAMSHD DDDNDDHAND VVMPGFRFHP TEEELIEFYL RRKVEGKRFN VELITFLDLY  60
HYDPWELPAL AAIGEKEWFF YVPRDRKYRN GDRPNRVTTS GYWKATGADR VIKNESSYSI  120
GLKKTLVFYT GKAPKGVRTS WIMNEYRLPR HESEQYKKAE ISLCRVYKRP GVEDHCPLPN  180
SISSRPSSSN AIQSSKKHNS GHQATRSSQA PQQNSPSSSE IDKLHEVGST SSTDDQATIV  240
FPQHRAYGAV APTSSMSSTS AEADQSLLHY SKQLASFLPN SAIFPSSSSS STAAVDDLHR  300
VVDYPHIYPH YPSQMLQLSS THSQSLQLNT LSNSLPTLSD KLWEWNPIPE ASRDYSSYK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02450.1	1e-104	NAC family protein