PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWR90198.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 578aa MW: 65609.9 Da PI: 5.5044 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 145.9 | 2.2e-45 | 147 | 273 | 3 | 129 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 +GfrFhPtd elv++yLk+kv g ++++ evi+e+d+yk+ePwdLp +++k+++ w+fF++ dkky tg rk+r + g+Wk tg+d++++ +++ RWR90198.1 147 KGFRFHPTDVELVMYYLKRKVLGIQFPF-EVISEIDLYKFEPWDLPgmSCLKSGDLVWFFFCSPDKKYGTGLRKKRDNDIGFWKVTGNDTPIFY-DSRI 243 7***************************.99***************6448888999**************************************.999* PP NAM 100 vglkktLvfykgrapkgektdWvmheyrle 129 vg+k++Lvf++g+a +g +tdWvmheyrle RWR90198.1 244 VGMKRSLVFHRGKAGRGDRTDWVMHEYRLE 273 ****************************85 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 578 aa Download sequence |
MGKPIQPNAD KNVEVSSELQ TPSYPIPPTR PIHVSVKRTV EIKVTRWKHA TNRGASSRLK 60 TAETRAEQTR LSLSLYLYLF YIFSFGLISR SSTRARVSPA RQMSLYLSNK YLYFVRCDFC 120 FLDRDRKHSD YLHRLQKNLI LGFKHFKGFR FHPTDVELVM YYLKRKVLGI QFPFEVISEI 180 DLYKFEPWDL PGMSCLKSGD LVWFFFCSPD KKYGTGLRKK RDNDIGFWKV TGNDTPIFYD 240 SRIVGMKRSL VFHRGKAGRG DRTDWVMHEY RLEDEVLSDA SISQDAFVLC KIFEKSGRGS 300 KNGEQYGAPF KEEDWSDDDD GDGNYSLMPI PCAGTISPSP RPEDEEMILS ALKSGNGCNS 360 LVQPLPQQSM TPVVTEQHPS SVEHDDIHEL FLNVTDEDGD TLTSNRVSVD KKVDSAVPNK 420 SIVQDAEDHE IFKGLEDITG NVELNFNELD CPNENMQYQR LSRFSEGLYL EELQDPMEVE 480 GAYLEFKDLC HPMEPNFPGH GRSDYLFAHH GTPVLPDLGA RDSLGGSWEG QEPTYGSAAF 540 STLSAEVGGI YTPQSLARGG FIDPQCHNCV ENPQFLTP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G64060.1 | 3e-71 | NAC family protein |