PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR90094.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family HSF
Protein Properties Length: 334aa    MW: 37921.1 Da    PI: 8.676
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR90094.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind113.71.2e-35221132102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+y++++d+++++++sw e+ ++fvv+ + ef++++Lp+yFkh+nf+SFvRQLn+YgF+k+  ++         weF+++ F+kg k+ll++i+
    RWR90094.1  22 FLTKTYQLVDDPSTDHIVSWGEDATTFVVWRPPEFSRDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANEFFRKGAKHLLCEIH 109
                   9*****************************************************************99.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+ks
    RWR90094.1 110 RRKS 113
                   **86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MAIMLDNCIL SLDTHKPVPA PFLTKTYQLV DDPSTDHIVS WGEDATTFVV WRPPEFSRDL  60
LPNYFKHNNF SSFVRQLNTY GFRKIVPDRW EFANEFFRKG AKHLLCEIHR RKSPLPQVSM  120
SHNHQHHHHT CIDGSGVSCF FTFTGGAKIS PPSSDDQANW CESSPILAGE GSIPALNEEN  180
VRLRRRNSML LLELAHMKKL YNDIIYLVQN HVRPVPPSTA YPSSLIFSNP GNVNSTEQKP  240
LQRLLGFHQS LPKYDQVKNT LNSTITSSSS ATVVEEPHGS SCSQTMLFGI PLQSKKRLHP  300
EPLSPSRDVE THRRRFLMRK EDLGLHLMPS SPCS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46264.12e-84HSF family protein