PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR90087.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family HSF
Protein Properties Length: 276aa    MW: 31495.7 Da    PI: 7.09
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR90087.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind114.95.3e-36111022102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+y++++d++++e+isw+e+g++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+  ++         weF+++ F +g+kell +i+
    RWR90087.1  11 FLTKTYQMVDDPNTNEVISWNESGTTFVVWCTAEFASDLLPRYFKHNNFSSFVRQLNTYGFRKIAPDR---------WEFANEFFCRGEKELLGEIH 98 
                   9*****************************************************************99.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+ks
    RWR90087.1  99 RRKS 102
                   **97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MVMQRGVPAP FLTKTYQMVD DPNTNEVISW NESGTTFVVW CTAEFASDLL PRYFKHNNFS  60
SFVRQLNTYG FRKIAPDRWE FANEFFCRGE KELLGEIHRR KSVPSASTAQ IPAIVRSNGH  120
PSSMSNSREE QESSSTSSSD PMKGDARKKT QISDLSEENE KLRKDNLVLS WELSQAKKQF  180
EELLVFLSKC LNVSPEKITS KMQEEGDGNL GLEKLLGFCE EEDNGEECLK LFGVLLKNSK  240
RKREEYGGPL MDVKMGHHHA TWMNICPSPK RTISLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36990.13e-68HSF family protein