PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR89892.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | CAMTA | ||||||||
Protein Properties | Length: 1046aa MW: 117155 Da PI: 5.9736 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 180.6 | 1.8e-56 | 20 | 136 | 2 | 118 |
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100 l+ ++rwl++ ei++iL n++k++++ e++++p+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK g+v+vl+cyYah+een++fqrr+yw RWR89892.1 20 LEAQSRWLRPPEICEILRNYHKFRIAPEPPNKPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENENFQRRSYW 118 5679*********************************************************************************************** PP CG-1 101 lLeeelekivlvhylevk 118 lLee+l +ivlvhy+evk RWR89892.1 119 LLEEDLMHIVLVHYREVK 136 ***************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1046 aa Download sequence |
MAEGRRYALS TQLDIEQILL EAQSRWLRPP EICEILRNYH KFRIAPEPPN KPPSGSLFLF 60 DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSVDVLH CYYAHGEENE NFQRRSYWLL 120 EEDLMHIVLV HYREVKGNKV NYSRTRDSEE TYQVTSRTMD TSSLNSVHTS ELDDSESDNH 180 QASSRYCSFL DEQSEDRPAM NNPMDAGLLN SHLSVSYPSD YHGKQLNVTG FNFMTLGQDN 240 LTRVDGSEFG LTFQDPGKQN CVASWVEALE HTGTQSHTAS IRPPVSSTKP TSIMGIPKPE 300 NVITGHFFTE ACGSKQQVVA SPLGQAQWQI VAEDDSSNTS TWPMDQNLDT DLAADLSASL 360 EERKDVVGLH AENGQVREEN LSYSSSTRHH LIDCSKKADD DLKKLDSFSR WMSKELEVDG 420 AHVQSSSGID WNIVENGNVA EDSGMSSQGH LDAYLLSPSL SQDQLFSILD FSPNWVYAGM 480 ETKVLVTGMF LRDKNDAQIC KWSCMFGEVE VPAEVLADGV LRCCAPVHGA GRVPFYVTCS 540 NRVACSEVRE FEYRIGHTRS VDTSDINEMF LRIRLGKLLS LESIGCPNPL SSTVGAKSHV 600 NSKISSLLKE NDNEWLQIEK LATDEDFCPD KVEELLLQKI LKEKLHGWLL HKVAEDGKGP 660 NVLDKEGQGV LHLAAALGYD WAIAPTIAAG VNINFRDVDG WTALHWAAFC GRERTVVALV 720 SLGGAPGALT HPTPKFPSGR TPADLASSNG HKGIAGYLAE SSLTSHLSSL TLETSSDGNT 780 SEVPDVKAVQ TVAEWSTTQF GDDDGLSLKD SLSAVRNAAQ AAARIHEVFR VQSFQRKQLI 840 EFGDDKFEMS DEQALSLISV KSNRTVQYDE PIHTAAIRIQ NKFRGWKGRK DFLIIRQRIV 900 KIQALVRGHQ VRKHYRKIVW SVGIVEKVIL RWRRKGSGLR GFRPGLIEDP TMQSASSKED 960 DYDFLKEGRK QTEARLDKAL ARVRSMVQYP EARDQYRRLL NGVTEFQETK VVLEKLLNSS 1020 EEAMEGDDMI DIEMLLGDDT IPPTVS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22300.2 | 0.0 | CAMTA family protein |