PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR89892.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family CAMTA
Protein Properties Length: 1046aa    MW: 117155 Da    PI: 5.9736
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR89892.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1180.61.8e-56201362118
        CG-1   2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100
                 l+ ++rwl++ ei++iL n++k++++ e++++p+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK g+v+vl+cyYah+een++fqrr+yw
  RWR89892.1  20 LEAQSRWLRPPEICEILRNYHKFRIAPEPPNKPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENENFQRRSYW 118
                 5679*********************************************************************************************** PP

        CG-1 101 lLeeelekivlvhylevk 118
                 lLee+l +ivlvhy+evk
  RWR89892.1 119 LLEEDLMHIVLVHYREVK 136
                 ***************986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 1046 aa     Download sequence    
MAEGRRYALS TQLDIEQILL EAQSRWLRPP EICEILRNYH KFRIAPEPPN KPPSGSLFLF  60
DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSVDVLH CYYAHGEENE NFQRRSYWLL  120
EEDLMHIVLV HYREVKGNKV NYSRTRDSEE TYQVTSRTMD TSSLNSVHTS ELDDSESDNH  180
QASSRYCSFL DEQSEDRPAM NNPMDAGLLN SHLSVSYPSD YHGKQLNVTG FNFMTLGQDN  240
LTRVDGSEFG LTFQDPGKQN CVASWVEALE HTGTQSHTAS IRPPVSSTKP TSIMGIPKPE  300
NVITGHFFTE ACGSKQQVVA SPLGQAQWQI VAEDDSSNTS TWPMDQNLDT DLAADLSASL  360
EERKDVVGLH AENGQVREEN LSYSSSTRHH LIDCSKKADD DLKKLDSFSR WMSKELEVDG  420
AHVQSSSGID WNIVENGNVA EDSGMSSQGH LDAYLLSPSL SQDQLFSILD FSPNWVYAGM  480
ETKVLVTGMF LRDKNDAQIC KWSCMFGEVE VPAEVLADGV LRCCAPVHGA GRVPFYVTCS  540
NRVACSEVRE FEYRIGHTRS VDTSDINEMF LRIRLGKLLS LESIGCPNPL SSTVGAKSHV  600
NSKISSLLKE NDNEWLQIEK LATDEDFCPD KVEELLLQKI LKEKLHGWLL HKVAEDGKGP  660
NVLDKEGQGV LHLAAALGYD WAIAPTIAAG VNINFRDVDG WTALHWAAFC GRERTVVALV  720
SLGGAPGALT HPTPKFPSGR TPADLASSNG HKGIAGYLAE SSLTSHLSSL TLETSSDGNT  780
SEVPDVKAVQ TVAEWSTTQF GDDDGLSLKD SLSAVRNAAQ AAARIHEVFR VQSFQRKQLI  840
EFGDDKFEMS DEQALSLISV KSNRTVQYDE PIHTAAIRIQ NKFRGWKGRK DFLIIRQRIV  900
KIQALVRGHQ VRKHYRKIVW SVGIVEKVIL RWRRKGSGLR GFRPGLIEDP TMQSASSKED  960
DYDFLKEGRK QTEARLDKAL ARVRSMVQYP EARDQYRRLL NGVTEFQETK VVLEKLLNSS  1020
EEAMEGDDMI DIEMLLGDDT IPPTVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22300.20.0CAMTA family protein