PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR89576.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

Nin-like

Protein Properties

Length: 993aa MW: 108497 Da PI: 5.0442

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR89576.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92	4.5e-29	587	637	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isle+l++yF++++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ RWR89576.1 587 EKSISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 637 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 993 aa Download sequence
MSEAEGEDPT TVLPEPPAKE STSVELEFMD LDLDLDPSWP FDPNPFGSYP SSPFLFSFSS 60 SPLQNPSQLQ PPFSSSSSDQ PSSPLWIFPD AADDKPADYA VPAFSGGFRL TPAVGNPHPV 120 NGKSMDDRMK IRLPPGSTTA VMDDEDSDGS CVIKERMTQA LRYFKESTEQ HVLVQVWAPV 180 KSGDRYVLTT SGQPFVLDPQ STGLLQYRTV SLMYMFSVDG ESDGDLGLPG RVFRQKLPEW 240 TPNVQYYSSK EYPRLNYALH YNVRGTLALP VFEASGQSCV GVVELIMTAQ KINYASEVDK 300 VCKALEAVNL KSSEILDHPS MQICNAGRQA ALAEILEILT VVCETHKLPL AQTWVPCRHR 360 SVLAYGGGSK KSCTSFDGSC MGQVCMSTTD VASYVVDAHM WGFRDACVEH HLQKGQGVAG 420 QAFALRKPCF SRDITQFGKS EYPLVHYARM FGLMSCLAVC LQSTHTGSDD YILEFFLPPN 480 FRDSKEQEDL LNCLSTTMKQ CFRSLNFAGK EPQEGSLEII EPPIIERPSS EVEAVIPDLM 540 EQRCLTEVDA QRNDSKLKKA DGSPTIAPLS DGKKNLRTCE RKRGKTEKSI SLEVLQQYFA 600 GSLKDAAKSL GVCPTTMKRI CRQHGISRWP SRKINKVNRS LSKLKRVIES VQGAEGAFSL 660 ASLTSPLPIA VGSITRPVNL QGSKQQPAGA KPSDLEVVRE NESINSKMPE SVDNGDKGDT 720 FLGGRLIAHQ GLAQEHSGSQ PELCKGLDGS KTGSGSGGES TDTPTSQDSC HGSSPTNEPH 780 LNNPFVSAIE VQGMNIDGPM GLTFPSSGIF HRSATYSLPD ALIAIRSPEL LSGRLVEDSG 840 SCKDFRDLCS SAAERCQDER APESSWTNPP CSEPIQQLAT PALTHTLPFG TSIQNVRTAT 900 IKATYKEDII RFRLPFSSGV FELNEEVSKR LKLDVGTFDI KYLDDDHEWV LLSCDADLQE 960 CMEISTSSGG HVIRLSVHDI VANFGSSCES SGD

Sequence ? help Back to Top

Protein Sequence Length: 993 aa Download sequence

MSEAEGEDPT TVLPEPPAKE STSVELEFMD LDLDLDPSWP FDPNPFGSYP SSPFLFSFSS  60
SPLQNPSQLQ PPFSSSSSDQ PSSPLWIFPD AADDKPADYA VPAFSGGFRL TPAVGNPHPV  120
NGKSMDDRMK IRLPPGSTTA VMDDEDSDGS CVIKERMTQA LRYFKESTEQ HVLVQVWAPV  180
KSGDRYVLTT SGQPFVLDPQ STGLLQYRTV SLMYMFSVDG ESDGDLGLPG RVFRQKLPEW  240
TPNVQYYSSK EYPRLNYALH YNVRGTLALP VFEASGQSCV GVVELIMTAQ KINYASEVDK  300
VCKALEAVNL KSSEILDHPS MQICNAGRQA ALAEILEILT VVCETHKLPL AQTWVPCRHR  360
SVLAYGGGSK KSCTSFDGSC MGQVCMSTTD VASYVVDAHM WGFRDACVEH HLQKGQGVAG  420
QAFALRKPCF SRDITQFGKS EYPLVHYARM FGLMSCLAVC LQSTHTGSDD YILEFFLPPN  480
FRDSKEQEDL LNCLSTTMKQ CFRSLNFAGK EPQEGSLEII EPPIIERPSS EVEAVIPDLM  540
EQRCLTEVDA QRNDSKLKKA DGSPTIAPLS DGKKNLRTCE RKRGKTEKSI SLEVLQQYFA  600
GSLKDAAKSL GVCPTTMKRI CRQHGISRWP SRKINKVNRS LSKLKRVIES VQGAEGAFSL  660
ASLTSPLPIA VGSITRPVNL QGSKQQPAGA KPSDLEVVRE NESINSKMPE SVDNGDKGDT  720
FLGGRLIAHQ GLAQEHSGSQ PELCKGLDGS KTGSGSGGES TDTPTSQDSC HGSSPTNEPH  780
LNNPFVSAIE VQGMNIDGPM GLTFPSSGIF HRSATYSLPD ALIAIRSPEL LSGRLVEDSG  840
SCKDFRDLCS SAAERCQDER APESSWTNPP CSEPIQQLAT PALTHTLPFG TSIQNVRTAT  900
IKATYKEDII RFRLPFSSGV FELNEEVSKR LKLDVGTFDI KYLDDDHEWV LLSCDADLQE  960
CMEISTSSGG HVIRLSVHDI VANFGSSCES SGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein