PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR89573.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 396aa MW: 44994.8 Da PI: 6.8931

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR89573.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	165.8	1.5e-51	14	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPt+eel+++yL+kkv+ +k++l +vi++vd++k+ePwd+++k+k +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk +++ + RWR89573.1 14 VPPGFRFHPTEEELLHYYLRKKVAYEKIDL-DVIRDVDLNKLEPWDIQEKCKIgstPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYT-S 110 69**************************.9***********964444222455**********************************.8 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 + +g++ktLvfykgrap+g+k+dW+mheyrl RWR89573.1 111 FKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 142 889*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
MEDMSLSVNG QSRVPPGFRF HPTEEELLHY YLRKKVAYEK IDLDVIRDVD LNKLEPWDIQ 60 EKCKIGSTPQ NDWYFFSHKD KKYPTGTRTN RATAAGFWKA TGRDKVIYTS FKRIGMRKTL 120 VFYKGRAPHG QKSDWIMHEY RLDDHTDNSP QSNASSSVGE STQEEGWVVC RVFKKKNYHK 180 TMDSPKNSSI TSDGHTQMFH STSDGALDQI LQYMGRMCKQ ETEPNNNRNC YNNNFNTNTN 240 YSNISRCLLR PIETNMGNGV YERSMQLPPL DSPTVQTLSG SSQSCYTPGD VPAMATGTEA 300 SVTDQSGGGH LNPVYPVEQG ISDWATLDRL LASQFNGHGE TSRQLASCFN DPNLNFCSTQ 360 DQDLPLLPYL RSRSFNPNQD YNSDNDLWNF GRSSSL

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

MEDMSLSVNG QSRVPPGFRF HPTEEELLHY YLRKKVAYEK IDLDVIRDVD LNKLEPWDIQ  60
EKCKIGSTPQ NDWYFFSHKD KKYPTGTRTN RATAAGFWKA TGRDKVIYTS FKRIGMRKTL  120
VFYKGRAPHG QKSDWIMHEY RLDDHTDNSP QSNASSSVGE STQEEGWVVC RVFKKKNYHK  180
TMDSPKNSSI TSDGHTQMFH STSDGALDQI LQYMGRMCKQ ETEPNNNRNC YNNNFNTNTN  240
YSNISRCLLR PIETNMGNGV YERSMQLPPL DSPTVQTLSG SSQSCYTPGD VPAMATGTEA  300
SVTDQSGGGH LNPVYPVEQG ISDWATLDRL LASQFNGHGE TSRQLASCFN DPNLNFCSTQ  360
DQDLPLLPYL RSRSFNPNQD YNSDNDLWNF GRSSSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	1e-109	NAC family protein