PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR89406.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | ERF | ||||||||
Protein Properties | Length: 192aa MW: 21147 Da PI: 10.2946 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.8 | 8.4e-21 | 36 | 85 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr ++ +gr++AeIrd ++ ++r +lg+f+taeeAa+a+++a+++l+g RWR89406.1 36 HFRGVRKRP-WGRFAAEIRDpWK----KTRKWLGTFDTAEEAARAYDEAARNLRG 85 69*******.**********883....5*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
MAVETLQLRK EAFPKREKEP ASVAAGAAAA PVKEAHFRGV RKRPWGRFAA EIRDPWKKTR 60 KWLGTFDTAE EAARAYDEAA RNLRGPKAKT NFAGEGEISI GSTAGVSSDT AGRLQMQLEQ 120 WRAAVFGSES RDLLSTVGRS SDYSGFKLEA VEAAVRSEQG KKPFPFDLNL PAPLAFFVRH 180 AIMSRDVYIL CS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50640.1 | 7e-22 | ERF family protein |