PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWR89350.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 226aa MW: 24360.5 Da PI: 10.1255 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51 | 3.5e-16 | 70 | 119 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + y+G+r ++rg+Wv+eIr+p+ + r++lg+f tae+Aa+a++ a+++l+g RWR89350.1 70 PVYRGIR--SRRGKWVSEIREPR----KaSRIWLGTFLTAEMAAAAYDVAALALKG 119 68****6..679*********94....36************************998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 226 aa Download sequence |
MEVDEPASHV RQRDRPNRAS PANVRHAKPL LPAPEGWAVG PIANMRPVFH PPFPTAAATS 60 RNRGRKTKHP VYRGIRSRRG KWVSEIREPR KASRIWLGTF LTAEMAAAAY DVAALALKGA 120 DAALNFPDSV SSNPVPASAS PSEIQAASAV AAAARVPKGV GEEMVWAERG NRRPTGGEED 180 FVDEEALFAL PKLLENMAEG MLLSPPRLNS PDSPDNSNGV SLWSYG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G52020.1 | 4e-27 | ERF family protein |