PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR89346.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | ERF | ||||||||
Protein Properties | Length: 216aa MW: 22843.4 Da PI: 6.3566 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.6 | 2.4e-16 | 58 | 106 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+G+ ++++g+Wv eIr+p gk++r++lg+f tae+Aa+a++ a+ +l+g RWR89346.1 58 SYRGI--RPRNGKWVTEIREP---GKSTRIWLGTFPTAEMAAAAYDVAAYALKG 106 79***..699**********8...557***********************9988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MHSHGRGNSA RATCRPTTLG PTTLSAPALP THTSQTPPPS PRPTAATSST TRGGKHPSYR 60 GIRPRNGKWV TEIREPGKST RIWLGTFPTA EMAAAAYDVA AYALKGKDAV LNFPESVHSN 120 PVPTSTSPSA IQAASAAAAA ARLPKRPGEE ITWSESCDQT MGGGEEFMDE EALFAMPKLL 180 ESMAEGMLLS PPRINSTGSD EDSPDYSDGE SLWSYG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 1e-36 | ERF family protein |