PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR89273.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 355aa MW: 41070 Da PI: 7.101

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR89273.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	180.6	4.1e-56	7	136	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPtdeelv++yL+kkv++++++l +vike+d+yk+ePwdL++ k+ e++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk+++s k RWR89273.1 7 VPPGFRFHPTDEELVDYYLRKKVASRTIDL-DVIKEIDLYKIEPWDLQEkcKIGMeEQTEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYS-K 103 69**************************.9***********952433333556**********************************.8 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrle 129 ++l+g++ktLvfykgrap+g+k+dW+mheyrle RWR89273.1 104 HSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136 899**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MNSFSQVPPG FRFHPTDEEL VDYYLRKKVA SRTIDLDVIK EIDLYKIEPW DLQEKCKIGM 60 EEQTEWYFFS HKDKKYPTGT RTNRATTAGF WKATGRDKAI YSKHSLIGMR KTLVFYKGRA 120 PNGQKSDWIM HEYRLETNEN GPPQEEGWAV CRVFKKRITA IRKATERESP CWYDEQVSFM 180 PDLDSPKGLD PDMGYHHPYS CKQELKLNYH VPRDTFVQLP QLESPKLPNS SGTLSGNSIP 240 AYALDINQGS TLQSSTLTQE EQMHKSHQHQ MNSIYNTNTE QAVDQVTDWR VLDKFVASQL 300 SHEDHVPKQT NYSNSSHSLH APDHMNLLLR QSNKPETVGE YASTSTSSCH IDMWK

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MNSFSQVPPG FRFHPTDEEL VDYYLRKKVA SRTIDLDVIK EIDLYKIEPW DLQEKCKIGM  60
EEQTEWYFFS HKDKKYPTGT RTNRATTAGF WKATGRDKAI YSKHSLIGMR KTLVFYKGRA  120
PNGQKSDWIM HEYRLETNEN GPPQEEGWAV CRVFKKRITA IRKATERESP CWYDEQVSFM  180
PDLDSPKGLD PDMGYHHPYS CKQELKLNYH VPRDTFVQLP QLESPKLPNS SGTLSGNSIP  240
AYALDINQGS TLQSSTLTQE EQMHKSHQHQ MNSIYNTNTE QAVDQVTDWR VLDKFVASQL  300
SHEDHVPKQT NYSNSSHSLH APDHMNLLLR QSNKPETVGE YASTSTSSCH IDMWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	1e-137	NAC family protein