PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR89127.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NAC
Protein Properties Length: 310aa    MW: 35888.6 Da    PI: 7.6379
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR89127.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM173.27.8e-54111411129
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                 +ppGfrFhPtdeel+ +yL+kkv+ + ++l +vi++vd++k+ePwdL+ k ++ +  ++ewyfF+++dkky+tg+r+nrat++g+Wkatg+dk+++ ++
  RWR89127.1  11 VPPGFRFHPTDEELLYYYLRKKVAYEVIDL-DVIRDVDLNKLEPWDLKdKcRIGSgPQNEWYFFTHKDKKYPTGTRTNRATNAGFWKATGRDKAIHLSN 108
                 69****************************.9***************943444443456**************************************** PP

         NAM  97 gelvglkktLvfykgrapkgektdWvmheyrle 129
                 ++ +g++ktLvfy+grap+g+ktdW+mheyrle
  RWR89127.1 109 SKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRLE 141
                 *******************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MMMPQNGQVT VPPGFRFHPT DEELLYYYLR KKVAYEVIDL DVIRDVDLNK LEPWDLKDKC  60
RIGSGPQNEW YFFTHKDKKY PTGTRTNRAT NAGFWKATGR DKAIHLSNSK RIGMRKTLVF  120
YTGRAPHGQK TDWIMHEYRL EDDTLEAQED GWVVCRVFKK KNHQRGLQPE EVIEEDHYSH  180
MKATGQSSFE QKHNFQMQYD MGFDNTMHLP QLLSPESNVT PFLPQISLNS MDIECSQNLM  240
KLTSDGGGIV QQERLNGDWS FLDKLLASHQ NLEQLCQGRL NPASQSIGSS VQRFPSQYLG  300
CGTNFLKFPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79580.11e-109NAC family protein