PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR88930.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

CPP

Protein Properties

Length: 817aa MW: 89277.3 Da PI: 6.2542

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR88930.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50.5	4e-16	496	534	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+CnCkkskClk+YCeCfaag++C e C+C+dC+Nk RWR88930.1 496 ACKRCNCKKSKCLKLYCECFAAGVYCVEPCSCHDCFNKP 534 589**********************************96 PP
2	TCR	50.5	4.1e-16	581	619	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks+ClkkYCeC++ g+ Cs++C+Ce+CkN RWR88930.1 581 RHKRGCNCKKSSCLKKYCECYQGGVGCSSNCRCEGCKNA 619 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 817 aa Download sequence
MDSPERNQIG TPISKFEDSP VFNYINNLSP IKPVKSLHSA QTFHSLNFAS IPSVFTSPHI 60 SSQKESRFLG RHHFSDFSKL EISSDDGDGG KMSTSFSGSV KLSDCGSASE QEKCDIGVSI 120 EEFNVERSNG RSKLSVKLPQ ALQYVGSLGY DNPDNDTSCC SIKMEMDEGA SLDKLPQENP 180 KEGTCSVETQ GQYQLEQTKE EGSCYDWEKL ISDAAPDVLI FNSSTESVTC REEDNNMVDF 240 DATSFALVSH PPQDEVDGLH NAQPVSSLHH HHHQQQQQNP INQLEEVEDG EQKETDHTPQ 300 LLPSVYQNKQ DTGDLSEKMD DKVGDCISLG KKVDTPQQRG MRRRCLVFDV GAHKKNAVDD 360 SKSDSLNSMQ SEGKCASDDK KLVPLRPGSG SSSQCMLPSI GLHLNALAST SKDFRIVKHE 420 SLTSVSRVIS MPRSVGSFHS LTATHNSTNQ SLAPNNAQGD LSSNGNAVQV MQDDLQEPAF 480 EIGEERRLEN AGEGEACKRC NCKKSKCLKL YCECFAAGVY CVEPCSCHDC FNKPVHEDTV 540 LATRKQIESR NPLAFAPKVI RNSETIPETG DEGINTPASA RHKRGCNCKK SSCLKKYCEC 600 YQGGVGCSSN CRCEGCKNAY GRKGGYAPAG TEEAEPEDEV SEVGEKDGIG KCQEIIEVHK 660 NEQLIDAVLP MTPFQICRKS VKVSFFSNGK PPRPSLVSGG SSSSCGGSSS SCVNTCQQLK 720 KSDFLQHQLT FEKHFQINPE DETPEILRGH CSPASGVKTT SPNGKRVSPP NRELGLSPGQ 780 RSTSTRKLIL QSIPSFPSLT PYHQSNGRSR TCGALKR

Sequence ? help Back to Top

Protein Sequence Length: 817 aa Download sequence

MDSPERNQIG TPISKFEDSP VFNYINNLSP IKPVKSLHSA QTFHSLNFAS IPSVFTSPHI  60
SSQKESRFLG RHHFSDFSKL EISSDDGDGG KMSTSFSGSV KLSDCGSASE QEKCDIGVSI  120
EEFNVERSNG RSKLSVKLPQ ALQYVGSLGY DNPDNDTSCC SIKMEMDEGA SLDKLPQENP  180
KEGTCSVETQ GQYQLEQTKE EGSCYDWEKL ISDAAPDVLI FNSSTESVTC REEDNNMVDF  240
DATSFALVSH PPQDEVDGLH NAQPVSSLHH HHHQQQQQNP INQLEEVEDG EQKETDHTPQ  300
LLPSVYQNKQ DTGDLSEKMD DKVGDCISLG KKVDTPQQRG MRRRCLVFDV GAHKKNAVDD  360
SKSDSLNSMQ SEGKCASDDK KLVPLRPGSG SSSQCMLPSI GLHLNALAST SKDFRIVKHE  420
SLTSVSRVIS MPRSVGSFHS LTATHNSTNQ SLAPNNAQGD LSSNGNAVQV MQDDLQEPAF  480
EIGEERRLEN AGEGEACKRC NCKKSKCLKL YCECFAAGVY CVEPCSCHDC FNKPVHEDTV  540
LATRKQIESR NPLAFAPKVI RNSETIPETG DEGINTPASA RHKRGCNCKK SSCLKKYCEC  600
YQGGVGCSSN CRCEGCKNAY GRKGGYAPAG TEEAEPEDEV SEVGEKDGIG KCQEIIEVHK  660
NEQLIDAVLP MTPFQICRKS VKVSFFSNGK PPRPSLVSGG SSSSCGGSSS SCVNTCQQLK  720
KSDFLQHQLT FEKHFQINPE DETPEILRGH CSPASGVKTT SPNGKRVSPP NRELGLSPGQ  780
RSTSTRKLIL QSIPSFPSLT PYHQSNGRSR TCGALKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-114	CPP family protein