PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR88704.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 310aa MW: 34934.4 Da PI: 6.9956

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR88704.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.7	9.2e-53	11	143	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk..leleev.ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 lppGfrFhP+deelv++yL+kkv+g+ +++e+ + evd++k+ePwdLp + + kewyfFs rd+kyatg+r+nrat sgyWkatgkd++v++ RWR88704.1 11 LPPGFRFHPRDEELVCDYLAKKVAGSGsrNSFESPmLIEVDLNKIEPWDLPDVACVGGKEWYFFSLRDRKYATGSRTNRATVSGYWKATGKDRQVIDVr 109 79*******************999865344333499*********6556689*********************************9876 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 +g+lvg++ktLvfy+grapkg+ktdWvmhe+rle RWR88704.1 110 RGALVGMRKTLVFYQGRAPKGRKTDWVMHEFRLE 143 8999*************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence
MSYLSLMEAK LPPGFRFHPR DEELVCDYLA KKVAGSGSRN SFESPMLIEV DLNKIEPWDL 60 PDVACVGGKE WYFFSLRDRK YATGSRTNRA TVSGYWKATG KDRQVIDVRR GALVGMRKTL 120 VFYQGRAPKG RKTDWVMHEF RLEGPSDSPK AFIKEDWVLC RVFYKNRGTS AKPCQENSYD 180 DTGSSSPPPL LDSFLCFDQP ALNVDGFEQV PCFSNFSQNN TSQQTNQTFL DLPQVETDIP 240 TSSLLQLGAL PDLGTFVNPF SCEKKVIKAV LDHISKLESN QKLGSSSYGE GGSESYLSSH 300 MNFPNIWNHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56010.2	2e-85	NAC family protein