PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR88675.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WRKY

Protein Properties

Length: 430aa MW: 47217.8 Da PI: 6.1927

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR88675.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.2	5.4e-31	209	267	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ RWR88675.1 209 SDNWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRNDPNMLVITYTSEHNHP 267 69***********************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MCSFWQRMEN NQGDLADILR VSGGSAGGSM NTPSIDWQFQ SEPMDLLSGI EELNDGFGNP 60 FLDMHDPLLH QGSDIVGPEF FDCSDSTGLV KMNSEGDDSI PSQIMGEEMK GPCNIFSRML 120 QISPNAKMPI FQHNSNPSPV VNSPRRIKPS SLEASEIIKS NNGSCLLEVQ MPPPRNPGIK 180 RRKSQTKKVV CIPAPAVANN RSSAEVVPSD NWAWRKYGQK PIKGSPYPRG YYRCSSSKGC 240 SARKQVERSR NDPNMLVITY TSEHNHPWPT QRNALAGSTR TQPLKKDAAS KNSPITPIPK 300 RTNSKEEPKE IEIHKDNRST VALGGSSSAT SGSVKEEIEK MEKPTMGTTD RKFDQDFSHQ 360 SYGPVQLDSN QSDDFFADLG ELVPDSLDIM FSEGFTGGKL EEDRGNKPMD PFSSLFACSG 420 NSFGEAGKGL

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MCSFWQRMEN NQGDLADILR VSGGSAGGSM NTPSIDWQFQ SEPMDLLSGI EELNDGFGNP  60
FLDMHDPLLH QGSDIVGPEF FDCSDSTGLV KMNSEGDDSI PSQIMGEEMK GPCNIFSRML  120
QISPNAKMPI FQHNSNPSPV VNSPRRIKPS SLEASEIIKS NNGSCLLEVQ MPPPRNPGIK  180
RRKSQTKKVV CIPAPAVANN RSSAEVVPSD NWAWRKYGQK PIKGSPYPRG YYRCSSSKGC  240
SARKQVERSR NDPNMLVITY TSEHNHPWPT QRNALAGSTR TQPLKKDAAS KNSPITPIPK  300
RTNSKEEPKE IEIHKDNRST VALGGSSSAT SGSVKEEIEK MEKPTMGTTD RKFDQDFSHQ  360
SYGPVQLDSN QSDDFFADLG ELVPDSLDIM FSEGFTGGKL EEDRGNKPMD PFSSLFACSG  420
NSFGEAGKGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G34830.1	4e-79	WRKY family protein