PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR88540.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NAC
Protein Properties Length: 329aa    MW: 37342.5 Da    PI: 9.0317
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR88540.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM62.21.6e-1915421664128
         NAM  64 rdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                 +++ky +g+r++r++ +g+Wkat  +kevl  +++ +g kktLvfy ++++  +kt+W+mheyr+
  RWR88540.1 154 TERKYLKGSRPSRTAGDGFWKATSIEKEVLGGDQSIIGYKKTLVFYYKEKN--KKTNWIMHEYRI 216
                 789****************************99999**********65555..5*********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MASLSLNLAH SFRNFSLRAT TGSSNGAAFP SSKSGGPVIL EIPLDKIRRP LMRTRANDPK  60
KVEELMESIR EIGLQEPIDV LEVDGVYYGF SGCHRYEAHQ RLGFPTIRCK IRRGTKETLR  120
TNLLSAGQEQ RMGSSKQCYH GIQCLCLQSR PTPTERKYLK GSRPSRTAGD GFWKATSIEK  180
EVLGGDQSII GYKKTLVFYY KEKNKKTNWI MHEYRIDKTD GSIGKQSLKM DGFVICRIYE  240
RHTKASKSDT RQMIQSFEYD TRTPISSLQS AEGDANELMQ LCQGESNCFT EEMTRASKSD  300
TRMDDHLIQS FEYDTCTPIS SLQIVHMLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.16e-24NAC family protein