PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR88472.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MYB_related | ||||||||
Protein Properties | Length: 73aa MW: 8247.89 Da PI: 4.0944 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 36.2 | 1.4e-11 | 26 | 66 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++++E+ l+ + +++lG + W++Ia +++ gRt++++ +w RWR88472.1 26 EFSEDEETLIERMFNLLGER-WSLIAGRIP-GRTAEEVEKYWT 66 69******************.*********.***********5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 73 aa Download sequence |
MADLKHSSDD VSDDSLGGSS QDSKAEFSED EETLIERMFN LLGERWSLIA GRIPGRTAEE 60 VEKYWTSRYS TSE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46410.1 | 8e-17 | MYB_related family protein |