PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR87956.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | LBD | ||||||||
Protein Properties | Length: 125aa MW: 13638.6 Da PI: 6.6701 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 44.3 | 5.1e-14 | 25 | 73 | 46 | 95 |
DUF260 46 lkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 lk+lp ++r a+ss+vyeA+ar+r PvyG+vg i +lq+q++ l+ +la RWR87956.1 25 LKELPMHQR-SAVSSMVYEANARVRAPVYGCVGAIASLQEQVDVLQPQLA 73 667666665.689*******************************999887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 125 aa Download sequence |
MLQSTLEKNL FDLINFLFQP FHLSLKELPM HQRSAVSSMV YEANARVRAP VYGCVGAIAS 60 LQEQVDVLQP QLAVGTGMSR GGAHEDVACL AGNFVESGSP SSKLTTHSHS RSLFAMDMVF 120 DQPNK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G31320.1 | 2e-19 | LBD family protein |