PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR87891.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family WRKY
Protein Properties Length: 352aa    MW: 39607 Da    PI: 10.2413
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR87891.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.41.1e-31286343359
                 -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 D+y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ edp+++++tYegeHnh+
  RWR87891.1 286 DEYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEDPSMLVVTYEGEHNHS 343
                 9************************9988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MEEVEEANKG AVECCHRVLN LLSQSKDELQ YRNLMVETGE AVYKFKKVVS LLNTSLGHGR  60
ARIVKKFQSP SPQKMFLDTP MSRIDTSAKS LRLLQRNFME NPTAEMDSSA RSSMRLSQNA  120
FLENSTLEMD SSVGKNSHLQ HPTQTPASHL HFLQQQQRFH LQQQMKFQAD MMFRRSNSGI  180
NLKFDSSSCT PTVSSNRSFL SSLSMDGSVS VPSLDGSSFH LIGASQSSDR NPLQPPKRRC  240
SGRGEDGSVK CGSSGRCHCS KRRKLRVKRS IRVPAISNKL ADIPPDEYSW RKYGQKPIKG  300
SPHPRGYYKC SSMRGCPARK HVERCLEDPS MLVVTYEGEH NHSRLMSQPA HA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.11e-101WRKY family protein