PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR87491.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family WRKY
Protein Properties Length: 305aa    MW: 34464.5 Da    PI: 10.1289
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR87491.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.21.3e-31234293260
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS-- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhek 60 
                 +D ++WrKYGqK++kgs++prsYY+C+s  gCp++k+ver+  dp+++++tYeg+Hnh+k
  RWR87491.1 234 SDDFSWRKYGQKPIKGSPYPRSYYKCSSMrGCPARKHVERCFGDPTMLIVTYEGDHNHSK 293
                 69************************9988****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MDAILQSKHA TAFTPYFKIE PKWKRDLLER LHHENCIRYS PPLHGKRIRK GPLPSSLHIS  60
PNELLENLNF PVPLRVDPTQ LDPPHPQFMQ LFHLHNRPNN SFQSFRQMQL SKSQHCCAET  120
DVIAQKNSSL QFDGCISLSS STIPSGQSFP SSISLDGSSI GKPMMQYSSL SMQSTRDDSS  180
MLSSKMKFGG KSEGESRKCG ASTGGCHCSK RRKLRIKRTI RVPAVSSKLA DIPSDDFSWR  240
KYGQKPIKGS PYPRSYYKCS SMRGCPARKH VERCFGDPTM LIVTYEGDHN HSKITFPMPN  300
IVIQH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.13e-49WRKY family protein