PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR87355.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

STAT

Protein Properties

Length: 734aa MW: 82665.9 Da PI: 6.2174

Description

STAT family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR87355.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	STAT	196.3	3.1e-61	229	351	1	122
STAT 1 ldvvllnalgqpvekdvevvasLlyadsglvveks.ddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipklkkypfl 98 ldv+l++alg +v+k++e+ asL+yad+g++vek+ ddaeapLLisydGvef+s+drp+kl++GrasfklkisqLsskc+nrLfri+f+ p+ ++ypfl RWR87355.1 229 LDVILSDALGCSVQKEMELFASLVYADNGAPVEKPkDDAEAPLLISYDGVEFPSSDRPIKLINGRASFKLKISQLSSKCENRLFRIQFCPPESQSYPFL 327 8*******************************999********************************************************** PP STAT 99 eavskpirCisrsrntrsssltkk 122 ea+s+pirCisr+rn+r+ss+ +k RWR87355.1 328 EALSRPIRCISRNRNSRTSSMLWK 351 *****************99886 PP

Sequence ? help Back to Top
Protein Sequence Length: 734 aa Download sequence
MAAQKPSISE GDEEYLMLKD LRISLEQKDG AFSLCLWIYL SNYTLFPATI IEQTHPDADG 60 SIPLLALNEE KKLMLFPMLF LHEEAPQPCN SASWTNLPCI AADAEFPLGK WVHVGCEVAT 120 NFVRLHINGG MVGEKPLSYS STKDPDHESV QKITLVGNDG GDQRMQGYVH FVRTYPMPTS 180 ISDHFPKNPP LELSIDSSSF SENYDVEESG DGLWSVVGGK ASCRRNFSLD VILSDALGCS 240 VQKEMELFAS LVYADNGAPV EKPKDDAEAP LLISYDGVEF PSSDRPIKLI NGRASFKLKI 300 SQLSSKCENR LFRIQFCPPE SQSYPFLEAL SRPIRCISRN RNSRTSSMLW KKTATTANQH 360 DRPQSAGPDE GSPKVQYNNG DGHSEILTPH VKYSPPFKRV KVVHEKSPMR IYADGFLEHL 420 DHGCNSQLLT TKDDGNVLRT SLRGRLANLE RTESIPSDSE SVHARNSAFK SMADLKTPIS 480 DFILFKYCLG GIYERSILLR EVITNASDED ITEFAQQVSL YTGCFHHRQQ ILIAKQLIKD 540 GNDTWNLISR NQHQVLWKNA AEEIEKKFMK ISNCSIRCLS DQDMVVLQRI SGCRDNITRE 600 NFDKMWFWLY PIASALSRGQ IKAMWECTSP KWIEGLITKE EAEASLSALQ ELPKPGNFIL 660 RFPTSRSWPH PDAGSLIVTY IGADYALRHR LLSLDDRVDK EIKRRPLQDL LLAEPELSQL 720 GRVTRQEIQT GGEI

Sequence ? help Back to Top

Protein Sequence Length: 734 aa Download sequence

MAAQKPSISE GDEEYLMLKD LRISLEQKDG AFSLCLWIYL SNYTLFPATI IEQTHPDADG  60
SIPLLALNEE KKLMLFPMLF LHEEAPQPCN SASWTNLPCI AADAEFPLGK WVHVGCEVAT  120
NFVRLHINGG MVGEKPLSYS STKDPDHESV QKITLVGNDG GDQRMQGYVH FVRTYPMPTS  180
ISDHFPKNPP LELSIDSSSF SENYDVEESG DGLWSVVGGK ASCRRNFSLD VILSDALGCS  240
VQKEMELFAS LVYADNGAPV EKPKDDAEAP LLISYDGVEF PSSDRPIKLI NGRASFKLKI  300
SQLSSKCENR LFRIQFCPPE SQSYPFLEAL SRPIRCISRN RNSRTSSMLW KKTATTANQH  360
DRPQSAGPDE GSPKVQYNNG DGHSEILTPH VKYSPPFKRV KVVHEKSPMR IYADGFLEHL  420
DHGCNSQLLT TKDDGNVLRT SLRGRLANLE RTESIPSDSE SVHARNSAFK SMADLKTPIS  480
DFILFKYCLG GIYERSILLR EVITNASDED ITEFAQQVSL YTGCFHHRQQ ILIAKQLIKD  540
GNDTWNLISR NQHQVLWKNA AEEIEKKFMK ISNCSIRCLS DQDMVVLQRI SGCRDNITRE  600
NFDKMWFWLY PIASALSRGQ IKAMWECTSP KWIEGLITKE EAEASLSALQ ELPKPGNFIL  660
RFPTSRSWPH PDAGSLIVTY IGADYALRHR LLSLDDRVDK EIKRRPLQDL LLAEPELSQL  720
GRVTRQEIQT GGEI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78540.1	0.0	STAT family protein