PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR87343.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

Trihelix

Protein Properties

Length: 285aa MW: 31701.7 Da PI: 9.6922

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR87343.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	68	1.9e-21	31	118	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergfersp....kqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +Wt +e+ aLi+a+r ++ +l+rg+lk+ +W+ev++ + ++ ++sp qC++k+e+l+kry+++k+++ + ++p++++++ RWR87343.1 31 CWTSEETAALIDAYRLKWYSLNRGNLKASHWQEVAESVTRTCPHVSPpktsLQCRHKIEKLRKRYRNEKQRSAAS--AAPPSWPFYRKMD 118 8***********************************66655554422228****************985..56667*****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MASSSSSPPP PPPPRPTNPL QASSRRLPPP CWTSEETAAL IDAYRLKWYS LNRGNLKASH 60 WQEVAESVTR TCPHVSPPKT SLQCRHKIEK LRKRYRNEKQ RSAASAAPPS WPFYRKMDSM 120 EIGAPSPNSD TTDDEDDAGD GRFNGHTRSI HRLLISGGNR PGGRSGGAAG PRIRIVKREV 180 VEEEDGSGFE AGKRRRTRKG EDGVGELVAA IRALGEGFVR MERLKMEMAR EAERMKMEME 240 MKTTEMILES QQRIVDAFVE GFGERNRSEE KAAAAASPSP LPHEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44730.1	2e-36	Trihelix family protein