PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR87271.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

bHLH

Protein Properties

Length: 526aa MW: 59806.4 Da PI: 4.9523

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR87271.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	34.1	4.9e-11	335	377	7	54
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + E++RR+++ ++f L +l+P++ +K + a+++ A++YIk+L RWR87271.1 335 ATEKQRREQLGDKFKALASLVPTP-----TKTDRASVVSDAIDYIKEL 377 78********************.....9**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 526 aa Download sequence
MECIVQLPQE DNGKMEKRKS MRERGDKDPQ FKEAKIASPK IRREQEIKTM DGGCDYFDPQ 60 DVNPIQGRID GQPQTAINCP EVAAMGGSSS NNLEDNLRLN FFLEDLSKTN PPSEVGMGID 120 LQQQLRFDLE QEYNSHLMQD MLQDSHSQLE HRNWEQDMQE MDIHQQQQIE QQQQMPLPHD 180 LQCFNSAAYL NPPYTTPDLL NLLHLPRCSV TSMLPASSIA FNSPESKHNN FNTLDMFSEL 240 PMTDSTSAST ILYDPPLQLS FPPQPPIFRD LFHSLPLHDY SLPGSRGGPY LGGVDDRDGN 300 GGVFQEGDGR QFDDSLLDFR RELPRSGKGE AKGFATEKQR REQLGDKFKA LASLVPTPTK 360 TDRASVVSDA IDYIKELHRR INELKILVEK KRCARERRKR LKVEDDASNE IESSSVTADR 420 DQPFNGSLRS SWLLRKSKET MVDVRIIEDE VNIKLTQRKK ANFILLVAKI LDELQLELLQ 480 LAGGNIGDYY IFMFNAKIGE DSSVYASAIA NKMIEVLDRQ HLNISC

Sequence ? help Back to Top

Protein Sequence Length: 526 aa Download sequence

MECIVQLPQE DNGKMEKRKS MRERGDKDPQ FKEAKIASPK IRREQEIKTM DGGCDYFDPQ  60
DVNPIQGRID GQPQTAINCP EVAAMGGSSS NNLEDNLRLN FFLEDLSKTN PPSEVGMGID  120
LQQQLRFDLE QEYNSHLMQD MLQDSHSQLE HRNWEQDMQE MDIHQQQQIE QQQQMPLPHD  180
LQCFNSAAYL NPPYTTPDLL NLLHLPRCSV TSMLPASSIA FNSPESKHNN FNTLDMFSEL  240
PMTDSTSAST ILYDPPLQLS FPPQPPIFRD LFHSLPLHDY SLPGSRGGPY LGGVDDRDGN  300
GGVFQEGDGR QFDDSLLDFR RELPRSGKGE AKGFATEKQR REQLGDKFKA LASLVPTPTK  360
TDRASVVSDA IDYIKELHRR INELKILVEK KRCARERRKR LKVEDDASNE IESSSVTADR  420
DQPFNGSLRS SWLLRKSKET MVDVRIIEDE VNIKLTQRKK ANFILLVAKI LDELQLELLQ  480
LAGGNIGDYY IFMFNAKIGE DSSVYASAIA NKMIEVLDRQ HLNISC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06170.2	2e-43	bHLH family protein