PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR87050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | WRKY | ||||||||
Protein Properties | Length: 182aa MW: 20857.2 Da PI: 9.802 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 104.2 | 7.3e-33 | 103 | 161 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk++++prsYYrCt++gC+vkk+v+r ++d+ +v++tYeg H+h+ RWR87050.1 103 LDDGYRWRKYGQKAVKNNKHPRSYYRCTHQGCNVKKQVQRLSKDEGIVVTTYEGMHTHP 161 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence |
MENYQILFHP SSSSSSLSSS TQLPLLSSNM QNSNVLTNTN GNSNGFWGLK TDVDVPKSDA 60 NNTAPHETFV GSQDEVKQEK KKGEKKVRRP RYAFQTRSHV DILDDGYRWR KYGQKAVKNN 120 KHPRSYYRCT HQGCNVKKQV QRLSKDEGIV VTTYEGMHTH PIEKSTDNFE HILNQMQIYS 180 GF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13080.1 | 2e-56 | WRKY family protein |