PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR87033.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

CAMTA

Protein Properties

Length: 1084aa MW: 121812 Da PI: 5.926

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR87033.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	156.8	4.4e-49	15	129	4	117
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywl 101 e +krwlk+ e++ iL+nf+ +l +e++++p+sgsl+L nrk++r++rkDG+sw+kk++g+tv E+he+LKvg++++l+cyYah+++np+fqrr+yw+ RWR87033.1 15 EaQKRWLKPLELLFILQNFDGDQLIHEPPQNPTSGSLFLLNRKVLRHYRKDGHSWRKKRNGRTVGEAHEHLKVGNTDTLNCYYAHGDQNPSFQRRIYWM 113 5599********************************************************************************************* PP CG-1 102 Leeelekivlvhylev 117 L+ + ++i lvhy++v RWR87033.1 114 LDPACSDIALVHYRQV 129 ************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1084 aa Download sequence
MQSGGGFDIN ELRREAQKRW LKPLELLFIL QNFDGDQLIH EPPQNPTSGS LFLLNRKVLR 60 HYRKDGHSWR KKRNGRTVGE AHEHLKVGNT DTLNCYYAHG DQNPSFQRRI YWMLDPACSD 120 IALVHYRQVT EGRNIVEPNL PTDSNSTFSQ STRFCDAQNP DSSGISELPD PYQNSVSSRC 180 MDKVSSRLAV GDNEWSFFGV DRLGDIGSSS EPESTLALPR FTEQLSLDGE HSYLAEKLPC 240 CSQNENFQEP AVFGSTRAVY GHDNLKDHPL QLQIEEHGLL LDLDIVDTAN QQHSQPADQV 300 FSIERKESPS WKELLECYLS STGTQEKISD QVRQEEFPDS AFMFRGGSQA KDMSSHDGLL 360 DSPERSKVSY AQDEQPEHLL SHWLDHRVND ANYMINTHHT SENNFLQLPT AEDNLLDPRN 420 STSEVFQEIG KSTISTCSYG TSTLDANSGV GMLTKTNITD WMDTRHVPFD NHKYCSEYSM 480 FDQDSLVGNP LGPDSSLTVS QMQRFSIREI SPEWAYTTGN TKVIITGDFL CDSSDCTWAC 540 MFGETEVHAE VIQTGVLRCF APPHVAGKVN FCVTAGNRES CSEVREFEYC ALPESPGFDN 600 KSPQADTTSK SSAELHLLVR FVDMLFFGYD NVSVQKEDSS KSESNASRNS KLDSNSWRQI 660 IEALRVGRDI PSCMEIMDWL LQELLKDKLQ HWLSSKCQED EGTICPLSKN EQGVIHMIAG 720 LGYEWALNSV LNSGVGINFR DGNGWTALHW AASFGREKMV AALVAAGASA VAVTDATSQD 780 PVGKNPASIA ASNGHRGLAG YLSEVALTSH LSLLTLEESE ISKGYAAVEA ERAIESIAER 840 TENIPVGEVE DQLSLKDSLA AARNAAQAAA RIQAAFRAHS FKKKRLRELM SYDENGWTPG 900 DIRGLSAAVK FQWAFHKLHN VKLNKAALSI QKKYRGWKRR RDFLTFRKNV VKIQAHVRGH 960 QVRKRFKELL WTVSILEKVI LRWRRKGVGL RGFRGDLESI DEAEDEDILK VFQKQKVHAV 1020 IEEAVSRVLS MVESPDARHQ YRRILERYRQ AKAEMVHTTS ETASSSQANE QIMENDGGDM 1080 YHLG

Sequence ? help Back to Top

Protein Sequence Length: 1084 aa Download sequence

MQSGGGFDIN ELRREAQKRW LKPLELLFIL QNFDGDQLIH EPPQNPTSGS LFLLNRKVLR  60
HYRKDGHSWR KKRNGRTVGE AHEHLKVGNT DTLNCYYAHG DQNPSFQRRI YWMLDPACSD  120
IALVHYRQVT EGRNIVEPNL PTDSNSTFSQ STRFCDAQNP DSSGISELPD PYQNSVSSRC  180
MDKVSSRLAV GDNEWSFFGV DRLGDIGSSS EPESTLALPR FTEQLSLDGE HSYLAEKLPC  240
CSQNENFQEP AVFGSTRAVY GHDNLKDHPL QLQIEEHGLL LDLDIVDTAN QQHSQPADQV  300
FSIERKESPS WKELLECYLS STGTQEKISD QVRQEEFPDS AFMFRGGSQA KDMSSHDGLL  360
DSPERSKVSY AQDEQPEHLL SHWLDHRVND ANYMINTHHT SENNFLQLPT AEDNLLDPRN  420
STSEVFQEIG KSTISTCSYG TSTLDANSGV GMLTKTNITD WMDTRHVPFD NHKYCSEYSM  480
FDQDSLVGNP LGPDSSLTVS QMQRFSIREI SPEWAYTTGN TKVIITGDFL CDSSDCTWAC  540
MFGETEVHAE VIQTGVLRCF APPHVAGKVN FCVTAGNRES CSEVREFEYC ALPESPGFDN  600
KSPQADTTSK SSAELHLLVR FVDMLFFGYD NVSVQKEDSS KSESNASRNS KLDSNSWRQI  660
IEALRVGRDI PSCMEIMDWL LQELLKDKLQ HWLSSKCQED EGTICPLSKN EQGVIHMIAG  720
LGYEWALNSV LNSGVGINFR DGNGWTALHW AASFGREKMV AALVAAGASA VAVTDATSQD  780
PVGKNPASIA ASNGHRGLAG YLSEVALTSH LSLLTLEESE ISKGYAAVEA ERAIESIAER  840
TENIPVGEVE DQLSLKDSLA AARNAAQAAA RIQAAFRAHS FKKKRLRELM SYDENGWTPG  900
DIRGLSAAVK FQWAFHKLHN VKLNKAALSI QKKYRGWKRR RDFLTFRKNV VKIQAHVRGH  960
QVRKRFKELL WTVSILEKVI LRWRRKGVGL RGFRGDLESI DEAEDEDILK VFQKQKVHAV  1020
IEEAVSRVLS MVESPDARHQ YRRILERYRQ AKAEMVHTTS ETASSSQANE QIMENDGGDM  1080
YHLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	1e-156	CAMTA family protein