PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR86975.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | NAC | ||||||||
Protein Properties | Length: 248aa MW: 27918.7 Da PI: 9.8415 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 165.2 | 2.2e-51 | 14 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeelvv+yLk+kv + +l++ ++i+e+d++k++PwdLp +++e yfFs r+ ky++g+r+nrat sgyWkatg dk++++ +++ RWR86975.1 14 LPPGFRFHPTDEELVVQYLKRKVFSCPLPA-SIIPEIDVCKSDPWDLPG---DSKQERYFFSIREAKYPNGNRPNRATGSGYWKATGLDKQIVAPrSNQ 108 79****************************.89***************3...456799***********************************986777 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +vg+kk+Lvfy+g+ pkg++tdW+mheyrl RWR86975.1 109 VVGMKKVLVFYRGKPPKGSRTDWIMHEYRL 138 8***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MEKMNFVRDG VVKLPPGFRF HPTDEELVVQ YLKRKVFSCP LPASIIPEID VCKSDPWDLP 60 GDSKQERYFF SIREAKYPNG NRPNRATGSG YWKATGLDKQ IVAPRSNQVV GMKKVLVFYR 120 GKPPKGSRTD WIMHEYRLSD ATGSRGCIVP QRKNSTQNAM MQMEDWVLCR IFLKKRSAKN 180 DGETTQACTN YRARNLGAPR IGFIDFMGRE TSSSSDSSSI TEISSAGSPN EENSSPNSFS 240 SSPCERKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 1e-87 | NAC family protein |