PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR86931.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family Trihelix
Protein Properties Length: 321aa    MW: 35795.9 Da    PI: 5.2402
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR86931.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix86.62.9e-2727120183
    trihelix   1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfd 83 
                 rWt+qe+l+Li+++r  e+r+rrg            + +p+W++v++++r++g++r+p+qC+++w+nl+++y+kike+e + +++s+s +++ +
  RWR86931.1  27 RWTRQEILVLIQGKRVAETRVRRGGprahqlggahhQVEPKWASVASYCRRHGVSRGPVQCRKRWSNLAGDYRKIKEWEAQISDGSESFWVMRN 120
                 8**********************8556667777777*********************************************9999998888766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MDPDPAQITS PTNGAVNDLN RPPRLPRWTR QEILVLIQGK RVAETRVRRG GPRAHQLGGA  60
HHQVEPKWAS VASYCRRHGV SRGPVQCRKR WSNLAGDYRK IKEWEAQISD GSESFWVMRN  120
DARRERRLPG FFDREVYEVL EGGDAAAEAA VAGAGEEEVG LDGLNSDFDP SKEEEEAAES  180
MEKEAEVEAG MPVSAETAER PEMEAEVAVP VSEKKYQPVY QEYLNPGTPN EQQPALNPEK  240
GSTSRDGKKR KRVSPEGGGV TNLQGQLIEI VEQNSRMMKT QFEAMNINCQ LDRDQRKDHT  300
ESLIGVLSRL ADALGRIADK L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.11e-86Trihelix family protein