PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR86814.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

G2-like

Protein Properties

Length: 351aa MW: 39231.9 Da PI: 8.2783

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR86814.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.4	2.8e-32	173	226	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ RWR86814.1 173 PRMRWTTNLHNRFVHAVELLGGHERATPKAVLELMDVKDLTLAHVKSHLQMYRT 226 9****************************************************7 PP
2	Myb_DNA-binding	48.6	1.9e-15	174	225	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ RWR86814.1 174 RMRWTTNLHNRFVHAVELLGGHeraTPKAVLELMDvKDLTLAHVKSHLQMYR 225 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MELFPVQPDL SLQIRPPETN KPISSCRTDE EMDATFWRRA LDSNMVKRDN ISELSLAKPR 60 TSDFNNTNNL HLGQILGHHV LHTNQHQFHL QHQLQGQNHH LHRLNPQDVC FMKPIKGIPV 120 YRNPPSFGFA QPTSLDASSS SSSSTATIPF TSQSIMRSRF LSRFSGKRSM RAPRMRWTTN 180 LHNRFVHAVE LLGGHERATP KAVLELMDVK DLTLAHVKSH LQMYRTVKTT DRPASSSGQS 240 GAFENGAAGE ISEDNLLDIC NPRGLEQVIQ QGRVVMNPSM DCSSVWSNSS SRGAWLHDKT 300 SDSRGSSLPS FEEEMDSNCL SYESISLSNA SNQPGTSSNK PNLDFTLGRS H

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MELFPVQPDL SLQIRPPETN KPISSCRTDE EMDATFWRRA LDSNMVKRDN ISELSLAKPR  60
TSDFNNTNNL HLGQILGHHV LHTNQHQFHL QHQLQGQNHH LHRLNPQDVC FMKPIKGIPV  120
YRNPPSFGFA QPTSLDASSS SSSSTATIPF TSQSIMRSRF LSRFSGKRSM RAPRMRWTTN  180
LHNRFVHAVE LLGGHERATP KAVLELMDVK DLTLAHVKSH LQMYRTVKTT DRPASSSGQS  240
GAFENGAAGE ISEDNLLDIC NPRGLEQVIQ QGRVVMNPSM DCSSVWSNSS SRGAWLHDKT  300
SDSRGSSLPS FEEEMDSNCL SYESISLSNA SNQPGTSSNK PNLDFTLGRS H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	3e-63	G2-like family protein