PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR86811.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

HSF

Protein Properties

Length: 486aa MW: 53516.1 Da PI: 4.5487

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR86811.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	118.4	4e-37	18	110	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y++++d++++ ++sws+++nsfvv+d+ ef+k++LpkyFkh+nf+SFvRQLn+YgFkkv+ ++ weF+++ F +g+k+ll+ i+ RWR86811.1 18 FLSKTYDMVDDPSTDAIVSWSTSNNSFVVWDPPEFSKHLLPKYFKHNNFSSFVRQLNTYGFKKVDPDR---------WEFANEGFLRGQKHLLKAIN 105 9**************************************************************999.........**************** PP XXXXX CS HSF_DNA-bind 99 rkkse 103 r+k + RWR86811.1 106 RRKPS 110 976 PP

Sequence ? help Back to Top
Protein Sequence Length: 486 aa Download sequence
MDGGGNPIAN AASAPPPFLS KTYDMVDDPS TDAIVSWSTS NNSFVVWDPP EFSKHLLPKY 60 FKHNNFSSFV RQLNTYGFKK VDPDRWEFAN EGFLRGQKHL LKAINRRKPS NVQAQPQQPQ 120 VQNASVGACV EVGKFGLEEE IERLKRDKNV LMQELVRLRQ QQQTTDHQLQ TLGQRLQGME 180 QRQQQMMSFL AKAMQSPGFL AQLVQQNDSN RRIAGVNKKR RLPKQENSEG SHATTSDGQI 240 VKYQPLMNEA AKAMLMQILK IDSVPSQSDT MDSGSSSSRI SGLTIAEVPP TSGLPYLEVA 300 SGFSGIRPSA AISEIQSSVA TDMATVSHLP DVSVLSGVQE AITPSQADMI IPELPQMQGM 360 VPESNVVNIP NEKFLVPGVD SGFMDPMSAG MDGTMPMEEG KISNDTDTDI LVDGIPTLPG 420 INDSFWEQFL SASPLSGDIE EAESSTQDPN VKETEIQLEQ EQGWNKIQYM DHLTEQMGLL 480 ASEGKE

Sequence ? help Back to Top

Protein Sequence Length: 486 aa Download sequence

MDGGGNPIAN AASAPPPFLS KTYDMVDDPS TDAIVSWSTS NNSFVVWDPP EFSKHLLPKY  60
FKHNNFSSFV RQLNTYGFKK VDPDRWEFAN EGFLRGQKHL LKAINRRKPS NVQAQPQQPQ  120
VQNASVGACV EVGKFGLEEE IERLKRDKNV LMQELVRLRQ QQQTTDHQLQ TLGQRLQGME  180
QRQQQMMSFL AKAMQSPGFL AQLVQQNDSN RRIAGVNKKR RLPKQENSEG SHATTSDGQI  240
VKYQPLMNEA AKAMLMQILK IDSVPSQSDT MDSGSSSSRI SGLTIAEVPP TSGLPYLEVA  300
SGFSGIRPSA AISEIQSSVA TDMATVSHLP DVSVLSGVQE AITPSQADMI IPELPQMQGM  360
VPESNVVNIP NEKFLVPGVD SGFMDPMSAG MDGTMPMEEG KISNDTDTDI LVDGIPTLPG  420
INDSFWEQFL SASPLSGDIE EAESSTQDPN VKETEIQLEQ EQGWNKIQYM DHLTEQMGLL  480
ASEGKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16820.2	1e-117	HSF family protein