PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR86613.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | HSF | ||||||||
Protein Properties | Length: 143aa MW: 16497.8 Da PI: 9.9728 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 117 | 1.1e-36 | 25 | 116 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y++++d++++++isw+++g++fvv+ + efa+++LpkyFkh+nf+SFvRQLn+YgF+k+ ++ weF+++ F++g+k+ll++i+ RWR86613.1 25 FLTKTYQLVDDPAIDDVISWNDDGTTFVVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANECFRRGEKRLLCDIH 112 9*****************************************************************99.........******************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k RWR86613.1 113 RRKI 116 *985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 143 aa Download sequence |
MAPPTVEQNG ESTAADAHRS LPTPFLTKTY QLVDDPAIDD VISWNDDGTT FVVWRPAEFA 60 RDLLPKYFKH NNFSSFVRQL NTYGFRKIVP DRWEFANECF RRGEKRLLCD IHRRKISPTA 120 PAVSPSSMMV ARLDLRRTPA RSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11660.1 | 3e-63 | HSF family protein |