PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR86540.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 737aa MW: 80797.7 Da PI: 4.4579

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR86540.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169	1.6e-52	9	138	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 lp GfrF+Ptdeelv++yLk+k++g++ ++ evi+evd++k+ePwdLp k +++++ ew+fFs+rd+ky++g+r+nrat++gyWkatgkd+ +++k RWR86540.1 9 LPLGFRFRPTDEELVNHYLKRKINGRRPDF-EVIREVDVCKCEPWDLPgKsVIQTNDPEWFFFSPRDRKYPNGQRSNRATEAGYWKATGKDRVIKAKss 106 699**********************999.99***********6446777888********************************99976 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyr 127 ++ ++g+kktLvfy+grap+g++t Wvmheyr RWR86540.1 107 GSIVIGTKKTLVFYRGRAPSGVRTCWVMHEYR 138 7778*************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 737 aa Download sequence
MAVLSFESLP LGFRFRPTDE ELVNHYLKRK INGRRPDFEV IREVDVCKCE PWDLPGKSVI 60 QTNDPEWFFF SPRDRKYPNG QRSNRATEAG YWKATGKDRV IKAKSSGSIV IGTKKTLVFY 120 RGRAPSGVRT CWVMHEYRPT EDEVNGDNVG IVKIFLVLDA TNLVNFNWGG FVLCRLFRKH 180 EEIVNSPNYD EVDPSGLSPT TSKFSPSPSK SSPDDTNHVR NADQFDTVPD QVTSDLDMQG 240 APQPSTMVIE KKPTNIKRWL ADSNMVSDIE DRQAEVVPGK VDPMIGELGM FDEPFFHQPD 300 SLDYLRDFNM DFLFDNGFEN DQLLGTSQGG QVEQDASSVQ LTQFLDTVLN DNDEYLSEVS 360 SGQRAALEMG RGEPQHEMEH SFCSQGADTL DSVTAIPSMS SSDADAEMTA PLPLQVDKRL 420 DGSVFSGPES FSSNLQYGSG PVCLVDGGAG WNVSPDHFTA EPLYFVPNSF EEPADQESLG 480 TNIDDGTGIK ITECQPGYLA SAMGVSPGLG GSTDNGAGII IRDSQPLPIG VSKGSFSSLY 540 ESSDGGTGIK IRDRQSHYVA NTGGTVFQGS APRRIRLQMK ISVRPMIGTG NKSSSDEEHN 600 EDQEAVSAAG ENMDDTNTEG SVVAGPYNAE KIHFLPNDDE EPNSEALNHL ADEFQDKAKL 660 LDSDVGTKTS PVSIIKRRRV TPKQDDEMGD AVKGQSLQFG RAKTGSSPSV YVVCTAIFLI 720 LSVLFVGVWR GLKSDVM

Sequence ? help Back to Top

Protein Sequence Length: 737 aa Download sequence

MAVLSFESLP LGFRFRPTDE ELVNHYLKRK INGRRPDFEV IREVDVCKCE PWDLPGKSVI  60
QTNDPEWFFF SPRDRKYPNG QRSNRATEAG YWKATGKDRV IKAKSSGSIV IGTKKTLVFY  120
RGRAPSGVRT CWVMHEYRPT EDEVNGDNVG IVKIFLVLDA TNLVNFNWGG FVLCRLFRKH  180
EEIVNSPNYD EVDPSGLSPT TSKFSPSPSK SSPDDTNHVR NADQFDTVPD QVTSDLDMQG  240
APQPSTMVIE KKPTNIKRWL ADSNMVSDIE DRQAEVVPGK VDPMIGELGM FDEPFFHQPD  300
SLDYLRDFNM DFLFDNGFEN DQLLGTSQGG QVEQDASSVQ LTQFLDTVLN DNDEYLSEVS  360
SGQRAALEMG RGEPQHEMEH SFCSQGADTL DSVTAIPSMS SSDADAEMTA PLPLQVDKRL  420
DGSVFSGPES FSSNLQYGSG PVCLVDGGAG WNVSPDHFTA EPLYFVPNSF EEPADQESLG  480
TNIDDGTGIK ITECQPGYLA SAMGVSPGLG GSTDNGAGII IRDSQPLPIG VSKGSFSSLY  540
ESSDGGTGIK IRDRQSHYVA NTGGTVFQGS APRRIRLQMK ISVRPMIGTG NKSSSDEEHN  600
EDQEAVSAAG ENMDDTNTEG SVVAGPYNAE KIHFLPNDDE EPNSEALNHL ADEFQDKAKL  660
LDSDVGTKTS PVSIIKRRRV TPKQDDEMGD AVKGQSLQFG RAKTGSSPSV YVVCTAIFLI  720
LSVLFVGVWR GLKSDVM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	676	680	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.1	9e-74	NAC family protein