PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR86527.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB_related

Protein Properties

Length: 460aa MW: 51263.9 Da PI: 9.0722

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR86527.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	35.4	2.6e-11	165	215	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46 +++WT+eE+ l+ +v ++G g W+tI + R+ ++k++w++ RWR86527.1 165 KQKWTAEEESALKAGVVKHGAGKWRTILKDPEfssilYLRSNVDLKDKWRN 215 79*********************************88*********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence
MVWCRQSKSI FLSEALEVIQ AINESCDWSI NCILRDIEGF VKYLEFIAFS HIPRLLNEPE 60 GVGRADSTTV SLSSRARGPV TFILLRPFLE HHQILSLSSG LPSLNELTPL QPFLFERRAK 120 SFPVFRQRAF SFFLLRGFSY IEEYKVCTFQ IIYKGVNFQS MGAPKQKWTA EEESALKAGV 180 VKHGAGKWRT ILKDPEFSSI LYLRSNVDLK DKWRNMSVTA NGFGSREKAR LALKRSQPTP 240 KHDDNPVTLS TEVENFDDEI VDAKPLAISN GAMQISGSKR SISRLDNLIV EAITNLKEPT 300 GSNKTAIAMY IEDQYFAPPN FKRLLSAKLK ALTTCGKLMK VKRKYRIAPS IAFSEGRSSG 360 LLLLEEKPRE SFKVEKDDFR PLTKSQIDSD LAKMRNMTAQ EAAAAAAQAV AEAEAALAAA 420 EEAAREAEAA EADAEVAQAF AEAAMMELKN RNTSKLMVSG

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence

MVWCRQSKSI FLSEALEVIQ AINESCDWSI NCILRDIEGF VKYLEFIAFS HIPRLLNEPE  60
GVGRADSTTV SLSSRARGPV TFILLRPFLE HHQILSLSSG LPSLNELTPL QPFLFERRAK  120
SFPVFRQRAF SFFLLRGFSY IEEYKVCTFQ IIYKGVNFQS MGAPKQKWTA EEESALKAGV  180
VKHGAGKWRT ILKDPEFSSI LYLRSNVDLK DKWRNMSVTA NGFGSREKAR LALKRSQPTP  240
KHDDNPVTLS TEVENFDDEI VDAKPLAISN GAMQISGSKR SISRLDNLIV EAITNLKEPT  300
GSNKTAIAMY IEDQYFAPPN FKRLLSAKLK ALTTCGKLMK VKRKYRIAPS IAFSEGRSSG  360
LLLLEEKPRE SFKVEKDDFR PLTKSQIDSD LAKMRNMTAQ EAAAAAAQAV AEAEAALAAA  420
EEAAREAEAA EADAEVAQAF AEAAMMELKN RNTSKLMVSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49950.1	9e-87	MYB_related family protein