PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR86443.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

DBB

Protein Properties

Length: 298aa MW: 32659.9 Da PI: 5.3903

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR86443.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	19.7	1.7e-06	4	46	5	41
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 C+ +e e++ C ++ lC+ C +++H+ H +vp RWR86443.1 4 QCNACEMVEASVMCCADEAALCRACDEKIHSAnklaskHLRVP 46 7****99*******************6677888887776 PP
2	zf-B_box	29.7	1.3e-09	52	94	1	37
zf-B_box 1 seerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 s++++C+ ++e +fC +++ llC++C +++H H RWR86443.1 52 SQMPNCDICQETTGYFFCLEDRALLCRKCDFAIHTAnayvsvH 94 6899*****99*******************555555566 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MKIQCNACEM VEASVMCCAD EAALCRACDE KIHSANKLAS KHLRVPLSNS PSQMPNCDIC 60 QETTGYFFCL EDRALLCRKC DFAIHTANAY VSVHQRFLLT GVKVGLEPKE SVVVPSVEKK 120 MNSTKNDREI TSKSLSKRGN PMSLPCDTKD VISDHAVGDG GLPAGKASFS GGSTPGIIPD 180 WRLDDFLGLT DFNQNYGFME QGSSKVDGVK FGDSEWSPIY QSAIEDGDVD EYLGQVPEVP 240 WTVPKIPSPP TASGLYWPKK IQNNLSADDS VSVPDICCLE SDRGYHLHTG NPKRQRNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	1e-84	DBB family protein