PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR86158.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

TALE

Protein Properties

Length: 599aa MW: 65636.9 Da PI: 7.0428

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR86158.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	30.8	4.9e-10	398	435	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ ++++ LAk++gL+ +qV++WF N R + RWR86158.1 398 FEHflHPYPTDADKQLLAKQTGLSRNQVSNWFINARVR 435 554459******************************88 PP
2	BELL	97.4	1.2e-31	268	335	5	72
BELL 5 lqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 ++ ka+L+sll+eV++rYkqy++qlq+vi sFe vagl +a+p++slA ka+S+hFrcLk+ai++q+ RWR86158.1 268 RRRMKARLISLLNEVYRRYKQYYQQLQAVITSFESVAGLSTAAPFISLAIKAMSKHFRCLKNAITDQL 335 56789************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 599 aa Download sequence
MSEGFEHEPF HVPQQSRRDK LRENPTSLQV GCSGLLYDPS TLLNGGPATQ NHHHHPPLKE 60 DPTNFMGFVG LGTGFFPPSS SSSSSSQLLL DLPQSSINHT FNQEDTNHFL YSSQITQNFR 120 AFDPSFDDGG GVAFKQQNLS YPHHDMMSTG QGLSLSLSSH YRNRSAGIFD EKGVGNYAAR 180 GVSGGGPMTR SSVPTGPFTG YAAILNGSRF LKPAQQLLEE LCNVGRGFYS DRNGGESPGS 240 PAGQDMERLS ENAIGGDDPI ESSSGGERRR MKARLISLLN EVYRRYKQYY QQLQAVITSF 300 ESVAGLSTAA PFISLAIKAM SKHFRCLKNA ITDQLHGTNK VSEDSLSKEE SQSFGLVDQG 360 IRQQIVPHNL SILEQPHIWR PQRGLPERAV AVLRAWLFEH FLHPYPTDAD KQLLAKQTGL 420 SRNQVSNWFI NARVRLWKPM VEEIHSLEMR QAQKVSEGEN SNGNVNGNGQ YKPPISPVLP 480 TDKEPQSTTS QKNQDPPLKR NRNDLAQLHN NCGESVNFSY ENVASHRGGG VGVSLASGNS 540 GISLTLGLHQ NNGGGLSEPL PLTAAHFGLE ENGSSYVMGG FESQNRRDIS GQLLHDFVG

Sequence ? help Back to Top

Protein Sequence Length: 599 aa Download sequence

MSEGFEHEPF HVPQQSRRDK LRENPTSLQV GCSGLLYDPS TLLNGGPATQ NHHHHPPLKE  60
DPTNFMGFVG LGTGFFPPSS SSSSSSQLLL DLPQSSINHT FNQEDTNHFL YSSQITQNFR  120
AFDPSFDDGG GVAFKQQNLS YPHHDMMSTG QGLSLSLSSH YRNRSAGIFD EKGVGNYAAR  180
GVSGGGPMTR SSVPTGPFTG YAAILNGSRF LKPAQQLLEE LCNVGRGFYS DRNGGESPGS  240
PAGQDMERLS ENAIGGDDPI ESSSGGERRR MKARLISLLN EVYRRYKQYY QQLQAVITSF  300
ESVAGLSTAA PFISLAIKAM SKHFRCLKNA ITDQLHGTNK VSEDSLSKEE SQSFGLVDQG  360
IRQQIVPHNL SILEQPHIWR PQRGLPERAV AVLRAWLFEH FLHPYPTDAD KQLLAKQTGL  420
SRNQVSNWFI NARVRLWKPM VEEIHSLEMR QAQKVSEGEN SNGNVNGNGQ YKPPISPVLP  480
TDKEPQSTTS QKNQDPPLKR NRNDLAQLHN NCGESVNFSY ENVASHRGGG VGVSLASGNS  540
GISLTLGLHQ NNGGGLSEPL PLTAAHFGLE ENGSSYVMGG FESQNRRDIS GQLLHDFVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	5e-88	TALE family protein