PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR86116.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

G2-like

Protein Properties

Length: 348aa MW: 38153.5 Da PI: 5.1386

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR86116.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	95	5.6e-30	159	212	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +prl+Wtp+LH+rFv++v++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl RWR86116.1 159 RPRLVWTPQLHKRFVDVVAHL-GIKNAVPKTIMQLMNVEGLTRENVASHLQKYRL 212 59*****************.******************************8 PP
2	Myb_DNA-binding	48.2	2.5e-15	161	211	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT+++++++vd+v+ lG + +ktI++ m+ +g+t++++ s++qky+ RWR86116.1 161 RLVWTPQLHKRFVDVVAHLGIKnaVPKTIMQLMNvEGLTRENVASHLQKYR 211 789*****************9*************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MGGVAEDIEE EGEGEEEEEE EDEEEEETSD LGLIASSEDE NRVMEWEDGL PSTDDLMPLS 60 QPLIPPELAS AFSISPEPRR SAIDVNRASQ NTLVNIRRHQ TASSNGLKSL PPFRPDPMDE 120 TGNSATESMR KGRRLDAEEG GDSTAANSAD DPSARTLKRP RLVWTPQLHK RFVDVVAHLG 180 IKNAVPKTIM QLMNVEGLTR ENVASHLQKY RLYLKRMQGL STEGPSSSDH LFASTPVPQS 240 LHEAPAAAGG GGGHVPIPMP YPAAPQMMPM PVPVPMPVMG MPHGGHGHMA AGMQPGGNHH 300 QHHPGVPNYH HGFESNPYHM FREQQQREWS GNKFGSIMSY PHMTPSNK

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MGGVAEDIEE EGEGEEEEEE EDEEEEETSD LGLIASSEDE NRVMEWEDGL PSTDDLMPLS  60
QPLIPPELAS AFSISPEPRR SAIDVNRASQ NTLVNIRRHQ TASSNGLKSL PPFRPDPMDE  120
TGNSATESMR KGRRLDAEEG GDSTAANSAD DPSARTLKRP RLVWTPQLHK RFVDVVAHLG  180
IKNAVPKTIM QLMNVEGLTR ENVASHLQKY RLYLKRMQGL STEGPSSSDH LFASTPVPQS  240
LHEAPAAAGG GGGHVPIPMP YPAAPQMMPM PVPVPMPVMG MPHGGHGHMA AGMQPGGNHH  300
QHHPGVPNYH HGFESNPYHM FREQQQREWS GNKFGSIMSY PHMTPSNK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G46640.3	2e-74	G2-like family protein