PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR86101.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WRKY

Protein Properties

Length: 299aa MW: 32866.6 Da PI: 6.0948

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR86101.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.2	1.4e-32	115	171	2	58
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 dDgy+WrKYGqK++k+s++prsYYrCt ++C++kk+vers+edp++++itYeg H h RWR86101.1 115 DDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSTEDPDTLIITYEGLHLH 171 8******************************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MAASEETSAI WSEGSEDELV RELLDDESPF FLLPKSIESE PSQSQEPLKN LFLSTLYSGP 60 TIQDIASVLS LNCQSSDSFS GNISQSKISV TEKGSSKMEN KYTLRIKSSG NTMADDGYKW 120 RKYGQKSIKN SPNPRSYYRC TNPRCSAKKQ VERSTEDPDT LIITYEGLHL HFAYSHFLLT 180 RPSLNDNTHS PPKKPKTHTQ VAQDEPHQVG PTSVDPLKIV TKHQPFGAVI ETPHTPQTQG 240 LLEDVVPLLI RNPSNNPTSS SDPCFSSYPS SPPLSTSSSS LSWSPNSSPL DMGMLSGLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43290.1	7e-49	WRKY family protein