PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR86054.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family E2F/DP
Protein Properties Length: 385aa    MW: 42697.4 Da    PI: 5.3064
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR86054.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP69.83.3e-22781481571
     E2F_TDP  15 klleksee.givtlnevakeLvse..............dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                 ++++k e  g++t++eva+e+++e              d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  RWR86054.1  78 SVCKKLEMkGRTTYSEVADEIIAElaapdvnpvplnefDEKNIRRRVYDALNVLMAMDIIAK-DKKEIQWKG 148
                 689999988*****************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    
MVTGNAMGGR YLTDLHCDID QTNFVANCAC SSKGCDQASQ KVACANSFSR KHLKIQEEDM  60
NGLMVGGSPN FFLFVLYSVC KKLEMKGRTT YSEVADEIIA ELAAPDVNPV PLNEFDEKNI  120
RRRVYDALNV LMAMDIIAKD KKEIQWKGFP RKSPDDIKEL EALRLGLMSR IEKKASYLHD  180
LQEQDNGVGV ERSSENESYQ LIGEGDSLCA IGWARGEASS PWSIVVLVEE IQGLVRGSTC  240
QSPFITFLRS ANEEADSLAC LGVTRPHIAG LQNLMLRNQR LHKSGAITAQ GIGLPFILVR  300
QTRREATVEI EISEDMQLVH FDFNGTPFSL LDEVSVLKAM RNPQDPDCGH ISQNLLPSQS  360
SSGHSNRSKS FNAIPFSWNS EFSNV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.13e-40E2F/DP family protein