PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR85800.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | NAC | ||||||||
Protein Properties | Length: 308aa MW: 35069 Da PI: 5.2396 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 168.5 | 2.3e-52 | 11 | 143 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhP+deelv +yL++kv+g++ +e+ +i e+d++k+ePwdLp+++ + kewyfF+ rd+kyatg r+nrat sgyWkatgkd++v++ RWR85800.1 11 LPPGFRFHPRDEELVLDYLANKVAGNDalnsFEF-PTIIELDLNKIEPWDLPEMACVGGKEWYFFCLRDRKYATGPRTNRATISGYWKATGKDRQVMDI 108 79************************98643222.3599*************7667799**************************************97 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrle 129 kg+lvg++ktLvfy+grapkg++tdWvmhe+rle RWR85800.1 109 rKGALVGMRKTLVFYQGRAPKGKRTDWVMHEFRLE 143 68899***************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 308 aa Download sequence |
MSFLSLMEAK LPPGFRFHPR DEELVLDYLA NKVAGNDALN SFEFPTIIEL DLNKIEPWDL 60 PEMACVGGKE WYFFCLRDRK YATGPRTNRA TISGYWKATG KDRQVMDIRK GALVGMRKTL 120 VFYQGRAPKG KRTDWVMHEF RLEGPHHLPK TPSQEDWVLC RVFYKNRGIS AKVCQENSYD 180 DTDSSLPPLM DTFLPFDQTP LTIDGFQQVP CFSNFSPNQT SEIINPTLTP LSQVESNITT 240 SSFPESSVPL DLTTFLDPLC YEKEVIKAVL DHFNKTEMDR KILEVVSTGF HEGGSGMGLS 300 PVWNECLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G56010.2 | 1e-94 | NAC family protein |