PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR85733.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NAC
Protein Properties Length: 304aa    MW: 34789.2 Da    PI: 8.0861
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR85733.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM160.56.5e-50231511128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kg 97 
                 l pGfrFhPtdeelv +yL++kve+k l++ e+ik++diyk++PwdLpk  +a++ke+yfF+ r +ky+++ r+nr+t sg+Wkatg d++++s+   +
  RWR85733.1  23 LLPGFRFHPTDEELVGFYLRRKVEKKLLSI-EIIKQIDIYKYDPWDLPKVSTAGDKECYFFCLRGRKYKNSIRPNRVTGSGFWKATGIDRPIYSAerAS 120
                 579***************************.89***************8888899***************************************85455 PP

         NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                   +glkk+Lv+y+g+a kg+ktdW+mhe+rl
  RWR85733.1 121 DCIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 151
                 55***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MGREENMDVV KMSSLDTSEE DVLLPGFRFH PTDEELVGFY LRRKVEKKLL SIEIIKQIDI  60
YKYDPWDLPK VSTAGDKECY FFCLRGRKYK NSIRPNRVTG SGFWKATGID RPIYSAERAS  120
DCIGLKKSLV YYRGSAGKGT KTDWMMHEFR LPPSGKSSNL LNAKNNQEAE IWTICRIFKR  180
TSSYRKYIPD WSDSSIKQNP ADASSKTCSF ESDDREKYLS FGTSNIQHIE KKPVISHSED  240
NSLLCSGQSY SIPQAPSTAL MYSNFPSSNT SEFFREGNWD ELGTILEFAV DPAIVYGSTY  300
INRY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.19e-89NAC family protein