PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR85521.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family G2-like
Protein Properties Length: 341aa    MW: 37922.2 Da    PI: 7.1153
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR85521.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.26.5e-32177232156
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                 k+r++W+peLH+rF++a++qLGGs+ AtPk+i+elmkv+gLt+++vkSHLQkYRl+
  RWR85521.1 177 KARRCWSPELHRRFLDALKQLGGSHAATPKQIRELMKVDGLTNDEVKSHLQKYRLH 232
                 68****************************************************97 PP
2Myb_DNA-binding45.12.4e-14179230148
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W++e++ +++da kqlGg    t+k I + m   g+t  ++ks++qky+
       RWR85521.1 179 RRCWSPELHRRFLDALKQLGGShaaTPKQIRELMKvDGLTNDEVKSHLQKYR 230
                      568*****************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MDYEEKMRRC QEYIDALEEE RKKIQVFHRE LPLSMHLVSQ AIENYRQQIA MESLFYGRSE  60
CEEQASGEGQ PVLEEFLPLK PSSSSEEDKS KETHDKAGKK SEWLMSVPLW NQDPPHETEE  120
SSRKSSAGGG VEMKKAGGAF HPYHGEKKMS GTPTAATSST AETGGRREEK EGESHRKARR  180
CWSPELHRRF LDALKQLGGS HAATPKQIRE LMKVDGLTND EVKSHLQKYR LHTRRPNHAI  240
QNSSSSNNQP HQFLLVGGIW VPPPDSSTMA QPSVGPRGNG VYALVPALPQ MSSIPLQQGE  300
KQTGIGPLHW DGRGSFEEGH VNSSSPTTSS SSHTTTTSPA F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25550.13e-71G2-like family protein