PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR85462.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NF-YA
Protein Properties Length: 316aa    MW: 34200.3 Da    PI: 9.9942
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR85462.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA99.43.6e-31155210258
   CBFB_NFYA   2 eplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                  +++VNaKQy++Il+RRq+Rak+e ekk+ +ksrkpylheSRh hA+rR Rg+gGrF
  RWR85462.1 155 GAIFVNAKQYNGILRRRQSRAKAEMEKKV-IKSRKPYLHESRHLHAMRRVRGCGGRF 210
                 689**************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MQTACYKGQG GVLQNPSVLS SPVPFAPWWT VIGSARNHGE LFGQLKPSNV DRPNEKGQTS  60
AAYGEVTHAA DQGTAIAFQE KGQNKDSRKE NKAQQLTTTI SFQSSSLEHQ THLGLGLAEP  120
MVFANHAYMD QYYNLHPAYG AQAKVLLPLN LTEDGAIFVN AKQYNGILRR RQSRAKAEME  180
KKVIKSRKPY LHESRHLHAM RRVRGCGGRF LNTKNENSGK EGSGIGKASS GYAQAIGSSS  240
SESLQSDSGN LNSGKAARSG SEVASIYYKG DTDRYRIAHL RSSNVPPPTN MIDGGPNSSI  300
TIKWGAADGC CSLLKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.28e-43NF-YA family protein