PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR85336.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 384aa MW: 43650.9 Da PI: 8.1273

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR85336.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	176.4	7.8e-55	52	177	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeel+++yL++kv++ ++ + ++i++vd++k+ePwdLp k++ +ekewyfF rd+ky+tg r+nrat++gyWk+tgkdke+++ +g RWR85336.1 52 LPPGFRFHPTDEELITFYLTRKVSDFNFVT-RAITDVDLNKCEPWDLPGKASMGEKEWYFFNLRDRKYPTGLRTNRATEAGYWKTTGKDKEIFH-SGVM 148 79***********************988.89***********988999*************************************.999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg+kktLvfykgrap+gek++Wvmheyrl RWR85336.1 149 VGMKKTLVFYKGRAPRGEKSNWVMHEYRL 177 ***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MAFWLIETTI PHILSSTGIL RRYPAKTQQY SSSSFQLFFF FLFCSIEMEE NLPPGFRFHP 60 TDEELITFYL TRKVSDFNFV TRAITDVDLN KCEPWDLPGK ASMGEKEWYF FNLRDRKYPT 120 GLRTNRATEA GYWKTTGKDK EIFHSGVMVG MKKTLVFYKG RAPRGEKSNW VMHEYRLQSK 180 YAYRPAKEEW VVCRVFQKSS SAKKPPSSPA SLPHLVESSC DTTLMNEIEE IDMPMPNLNS 240 LVSFSSDFSS VSTNNNNIIP SNNNNNNHNN NSNINNGSGS NNNNMNMNMN NEMNMNWGFT 300 NATTNHPSLN WPSGLLNSSF STNSSILKAL QFACQPQEGS NLSSLIAQGE CLQTNMNSNF 360 ASSSSSKGTN SMQQQPFHLD SIWR

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MAFWLIETTI PHILSSTGIL RRYPAKTQQY SSSSFQLFFF FLFCSIEMEE NLPPGFRFHP  60
TDEELITFYL TRKVSDFNFV TRAITDVDLN KCEPWDLPGK ASMGEKEWYF FNLRDRKYPT  120
GLRTNRATEA GYWKTTGKDK EIFHSGVMVG MKKTLVFYKG RAPRGEKSNW VMHEYRLQSK  180
YAYRPAKEEW VVCRVFQKSS SAKKPPSSPA SLPHLVESSC DTTLMNEIEE IDMPMPNLNS  240
LVSFSSDFSS VSTNNNNIIP SNNNNNNHNN NSNINNGSGS NNNNMNMNMN NEMNMNWGFT  300
NATTNHPSLN WPSGLLNSSF STNSSILKAL QFACQPQEGS NLSSLIAQGE CLQTNMNSNF  360
ASSSSSKGTN SMQQQPFHLD SIWR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18400.1	1e-94	NAC family protein