PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWR85215.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 232aa MW: 26244.3 Da PI: 4.6618 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 137.1 | 1.1e-42 | 4 | 136 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 lppGfrF Pt+eelv +yL++k+egk+ le+vi+ vdi++++Pw+Lp+ ++ ++++ew+fFs+r++++a+g r+nr+t sgyWkatg+ ++s+ RWR85215.1 4 LPPGFRFFPTEEELVGFYLRNKLEGKREGLERVIPIVDIFSLDPWELPSisgELCTGDEEWFFFSPRQEREARGGRPNRITPSGYWKATGTPSYIFSSt 102 79*************************999999***************54565666999*************************************998 PP NAM 96 ..kgelvglkktLvfykgrapkgektdWvmheyr 127 +++++glk+++vfy g+ap+g+kt+W ++ey+ RWR85215.1 103 ttDSHKIGLKRSMVFYVGKAPTGNKTKWKVNEYK 136 888889***************************8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 232 aa Download sequence |
MSSLPPGFRF FPTEEELVGF YLRNKLEGKR EGLERVIPIV DIFSLDPWEL PSISGELCTG 60 DEEWFFFSPR QEREARGGRP NRITPSGYWK ATGTPSYIFS STTTDSHKIG LKRSMVFYVG 120 KAPTGNKTKW KVNEYKAYEE ASTSSAAPKV RDEMSLCRVY VTSGTLRSFD RRPLVSGTGE 180 MLQREETSRA ITDGTSMEEQ GTSMNPSLAE DADPELNTMD ELDALWNSFN WD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G22380.1 | 8e-76 | NAC family protein |