PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR84723.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | NAC | ||||||||
Protein Properties | Length: 350aa MW: 40195 Da PI: 7.2696 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 172.3 | 1.5e-53 | 9 | 138 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPtdeel+++yLkkk++ +k++l evi+evd++k+ePwdL++ ++ + ++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk + + + RWR84723.1 9 VPPGFRFHPTDEELLHYYLKKKISFQKFDL-EVIREVDLNKIEPWDLQErcRIGSaPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRN-T 105 69****************************.99**************963433332566*************************************9.8 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrle 129 +++g++ktLvfy+grap+g+ktdW+mheyrle RWR84723.1 106 YKKIGMRKTLVFYRGRAPHGQKTDWIMHEYRLE 138 999****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 350 aa Download sequence |
MASSSAAGVP PGFRFHPTDE ELLHYYLKKK ISFQKFDLEV IREVDLNKIE PWDLQERCRI 60 GSAPQNEWYF FSHKDRKYPT GSRTNRATNA GFWKATGRDK CIRNTYKKIG MRKTLVFYRG 120 RAPHGQKTDW IMHEYRLEEI DDEQGNATEE GWVVCRVFKK KNLFKVGNEG STSLGPERPI 180 NGHDQSRNLT INDHLHYQRR QQNTHDDLQT FQLYKPELAL HYSHLPDTPY QHHLQVQAQG 240 QAHKPVGYDF STSLPNDSPA MVKQFLAGHS DAGLARQVQY QGCEVGACEP GQQMVEGNEW 300 AMLDRLVNTH MGQEEDSSKG VVGFPDENAS VQQMNPVPLR GEMDLWGYGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G10350.1 | 1e-140 | NAC family protein |