PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWR84713.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 99aa MW: 11699.4 Da PI: 7.6321 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33.8 | 8e-11 | 33 | 71 | 6 | 46 |
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +eE++l+ +++++lG + W++I+ +++ +Rt++++ +w++ RWR84713.1 33 PEEEDLISRLHRLLGDR-WELISGRLP-NRTAEEVERYWRM 71 8**************99.*********.***********85 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 99 aa Download sequence |
MEGAVHHSSD RDSIQEIGEN QYCEKGKWHD MLPEEEDLIS RLHRLLGDRW ELISGRLPNR 60 TAEEVERYWR MKESKMSEHK VLRPVCVRAK PSLKLAKMS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G01060.1 | 1e-18 | MYB_related family protein |