PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR84698.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 200aa MW: 22621.4 Da PI: 7.442 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 78.2 | 6.1e-25 | 10 | 58 | 2 | 50 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 rien rqvtf+kRr+g+lKKA+ELSvLCda++ ++ifs++gklye + RWR84698.1 10 RIENPVHRQVTFCKRRAGLLKKANELSVLCDADIGLMIFSTHGKLYELA 58 8*********************************************965 PP | |||||||
2 | K-box | 58.3 | 3.2e-20 | 90 | 173 | 17 | 100 |
K-box 17 lqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 l+qe+ Lk+eie Lq+ + + G ++++L+l+eL+ Le+qLe +++iRs K+e+++++i+ l+kke l +n+ L+ k+ee RWR84698.1 90 LKQEILMLKQEIELLQKGLSYISGGEMGTLTLNELHALERQLEIWMREIRSAKMEIMCQEIQLLKKKEGILIAANEFLQGKIEE 173 68*******************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MARGKIQMRR IENPVHRQVT FCKRRAGLLK KANELSVLCD ADIGLMIFST HGKLYELATN 60 GRSMEGLIER YRKASGGDEV GGEGNPPPGL KQEILMLKQE IELLQKGLSY ISGGEMGTLT 120 LNELHALERQ LEIWMREIRS AKMEIMCQEI QLLKKKEGIL IAANEFLQGK IEEQNGIFNV 180 PPILTEIPQS LTIQNEIFQF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71692.1 | 2e-67 | MIKC_MADS family protein |