PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR84548.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 272aa MW: 31968.6 Da PI: 8.2867

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR84548.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	153	1.4e-47	15	142	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kge 98 pGfrFhPt+eel+ +yLk v gkkl + ++i ++++y+++PwdLp +k +e+ewyfF++rd+k+a+g r+nr+t++g+Wkatg+d+++ s ++ RWR84548.1 15 LPGFRFHPTEEELLEFYLKGVVYGKKLAF-DIIGTLNLYRHDPWDLPGLAKIGEREWYFFVPRDRKHANGGRPNRTTENGFWKATGSDRPIRSMkdPKR 112 59**********************999.99***********8888899*********************************99866677 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 ++gl+ktLvfykgrap+g ktdWvm+eyr+ RWR84548.1 113 VIGLRKTLVFYKGRAPRGCKTDWVMNEYRM 142 8*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
MEEKRASSTT ELDQLPGFRF HPTEEELLEF YLKGVVYGKK LAFDIIGTLN LYRHDPWDLP 60 GLAKIGEREW YFFVPRDRKH ANGGRPNRTT ENGFWKATGS DRPIRSMKDP KRVIGLRKTL 120 VFYKGRAPRG CKTDWVMNEY RMPDTCPLPK EDIVLCKIYR KATSLKVLEQ RAAMEDDAKM 180 SQFCAYATET ASSPEEENWQ VPMPLKEEFF MEKRMETEKE REVSSRLQGD AKVSLPQLQL 240 PKSNNMEWMQ DPFLFRSPWF ENWTPYANVL NF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	1e-105	NAC family protein