PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR84479.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 318aa MW: 35820.4 Da PI: 7.8894

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR84479.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	165.7	1.6e-51	14	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrF Ptdeel+ +yL++kv+g+++++ ++i ++d+yk++Pw Lp+k+ +ekewyfFs+rd+ky++g+r+nr++ sgyWkatg+dk +++ +g++ RWR84479.1 14 LPPGFRFFPTDEELLLHYLCPKVAGQHFSI-QIIGDIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKLITA-GGKK 110 79**************************.89***********8888899**********************************9.99 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg+kk Lvfy g+apkg+kt+W+mheyrl RWR84479.1 111 VGIKKALVFYIGKAPKGSKTNWIMHEYRL 139 ***************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence
MGPGQAEDVS QLSLPPGFRF FPTDEELLLH YLCPKVAGQH FSIQIIGDID LYKFDPWVLP 60 NKALFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKLITAGGKK VGIKKALVFY 120 IGKAPKGSKT NWIMHEYRLL ENTRKKGSTR LDDWVLCRIY KKNSGTQVSE SAKERNAIGY 180 PSPSPCQDDV MLESLPEIND RFFSLPRINS LKSFQNDRQT HQSIGNVDWM GQRSEFGSNG 240 QNQSQGAMAH FSFPAIPPLC QVESPSEMLG SSVEDEVESA LFENGLTQHQ NPQLTQWVDS 300 FVSAYPSQFA NLSYGCRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27410.2	1e-114	NAC family protein